RAPD PCR Colony Miniprep
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Edit the program or pick up a program (No 10) if the program has been set.
Reaction time for RAPD PCR .
1 cycle : Denature 95 C for 2 min
45 cycle of
Denature 94 C 15 sec
Anneal 40 C 30 sec
Extend 72 C 90 sec
1 cycle of 72 C for 5 min
4 C hold
- Inoculate a touched-bacterial colony with a sterile toothpick into 100 µl of sterile H2O and voltex the tube.
- Boil (95 C) for 5 min in the water bath
- Cool on the ice for 1-2 min and voltex.
- Spin (14 K, 5 min).
- Withdraw 2 µl of the sample (supernatent), add to 16 µl H2O in the 0.2 ml tube, and add a mixture of 2.5 µl 10X PCR buffer, 2 µl 2.5 µM primer , 2 µl 2.5 mM dNTP (2.5 mM each of dATP, dCTP, dGTP, and dTTP) and 0.5 U AmpliTaq.
- Seal the tube cap.
- RUN to start the program.
- After the whole cycle, add 2.5 µl stopping dye.
- Withdraw 10 or 12.5 µl of sample with a P-20 pipet and subject to electrophoresis (1.2 or 1.4 % agarose gel, 160 V) for 1 hr.
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