Sequence File Format Conversion with Command‐Line Readseq
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Abstract
One of the major challenges in using bioinformatics software is that there are a wide variety of sequence formats, e.g., GenBank, EMBL, and FASTA. It is often the case that a sequence or a set of sequences is in one format but is needed in another. This unit offers a solution to this problem ? Readseq. Readseq is a program that can read and write 18 different formats
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- Obtaining Readseq
- Using Readseq Classic for Unix and DOS
- Sample Sequence Conversions
- Figures
- Tables
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Figure a0.1E.1 Readseq classic commands. See APPENDIX , Unix Survival Guide, for more details. View Image
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