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        Sequence File Format Conversion with Command‐Line Readseq

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        • Abstract
        • Table of Contents
        • Figures
        • Literature Cited

        Abstract

         

        One of the major challenges in using bioinformatics software is that there are a wide variety of sequence formats, e.g., GenBank, EMBL, and FASTA. It is often the case that a sequence or a set of sequences is in one format but is needed in another. This unit offers a solution to this problem ? Readseq. Readseq is a program that can read and write 18 different formats

             
         
        GO TO THE FULL PROTOCOL:
        PDF or HTML at Wiley Online Library

        Table of Contents

        • Obtaining Readseq
        • Using Readseq Classic for Unix and DOS
        • Sample Sequence Conversions
        • Figures
        • Tables
             
         
        GO TO THE FULL PROTOCOL:
        PDF or HTML at Wiley Online Library

        Materials

         
        GO TO THE FULL PROTOCOL:
        PDF or HTML at Wiley Online Library

        Figures

        •   Figure a0.1E.1 Readseq classic commands. See APPENDIX , Unix Survival Guide, for more details.
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        GO TO THE FULL PROTOCOL:
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