内切酶PCR反应中的活性
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酶切反应条件如下:在20 µl PCR产物混合体系中加入5U的内切酶,按相应的反应温度温育1小时。通常20 µl PCR产物体系中含有1 µg底物DNA,1单位的Vent DNA聚合酶,1× ThermoPol Buffer [10 mM KCl, 20 mM Tris-HCl (PH 8.8@25°C),10 mM (NH4 )2 SO4 , 2 mM MgSO4和0.1% Triton X-100],以及终浓度为200 µM的dNTPs。表中标记有的内切酶在酶切反应前需加入NaCl(终浓度为100 mM)或相应的10× NEBuffer(1×终浓度)。
注意:在非最佳条件下进行酶切反应容易出现星号活性。要避免星号活性或希望取得更好的酶切效果,则需用乙醇沉淀纯化DNA,再将其溶解于相应的酶切缓冲液。此外,如果使用不纯的DNA聚合酶,会因其中混有其它核酸酶而影响整个反应结果。
+++表示完全切割;++表示约50%被完全切割;+表示约25%被完全切割。
| 酶 | 
				 
					在反应物中的活性 
			 | 
		
|---|---|
| Aat II | + + + | 
| Acc I | + | 
| Acc65 I | + + | 
| Aci I | + + + | 
| Acl I | + + | 
| Afl II | + + + | 
| Afl III | + + | 
| Age I | + + + | 
| Ahd I | + + | 
| Alu I | + + + | 
| Alw I | + + | 
| AlwN I | + + | 
| Apa I | + ++ | 
| ApaL I | + + + | 
| Apo I | + + | 
| Asc I | + + + | 
| Ase I | + | 
| Ava I | + + + | 
| Ava II | + + | 
| Avr II | + + + | 
| Bae I | none | 
| BamH I | <center> + + +</center> | 
| Ban I | + + + | 
| Ban II | + + + | 
| Bbs I | + + + | 
| Bbv I | + + | 
| Bcg I | + + | 
| BciV I | + + | 
| Bcl I | + + + | 
| Bfa I | none | 
| Bgl I | + | 
| Bgl II | + + + | 
| Blp I | + + + | 
| Bmr I | <center> <font>+ + +</font></center> | 
| Bpm I | + + | 
| Bsa I | + | 
| BsaA I | + + + | 
| BsaB I | + + | 
| BsaH I | + + + | 
| BsaJ I | + + + | 
| BsaW I | + + | 
| BseR I | + + + | 
| Bsg I | + + | 
| BsiE I | + + | 
| BsiHKA I * | + + | 
| BsiW I | + + | 
| Bsl I | + + | 
| Bsm I | + + + | 
| BsmB I | + + | 
| BsmF I | + + | 
| BsoB I | + + + | 
| Bsp1286 I | + + + | 
| BspD I | + + | 
| BspE I * | + + + | 
| BspH I | + + | 
| BspM I | none | 
| Bsr I | + + + | 
| BsrB I | + + + | 
| BsrD I | + + | 
| BsrF I | + + | 
| BsrG I | + + | 
| BssH II | + + | 
| BssK I | + + | 
| BssS I | + + + | 
| BstB I | + + + | 
| BstE I | + + + | 
| BstN I | + + | 
| BstU I | + + | 
| BstX I | + + + | 
| BstY I | + + | 
| BstZ17 I | + + | 
| Bsu36 I | + + + | 
| Btg I | <center> <font>+ + +</font></center> | 
| Bts I | <center> <font>+ + +</font></center> | 
| Cac8 I | + + + | 
| Cla I | + + | 
| Dde I | + + + | 
| Dpn I | (none, requires methylated substrate) | 
| Dpn II | + + + | 
| Dra I | + + | 
| Dra III * | + + + | 
| Drd I | + + | 
| Eae I | + + + | 
| Eag I | + | 
| Ear I | + + + | 
| EcoN I | + + | 
| EcoO109 I | + + + | 
| EcoR I | + + | 
| EcoR V | + + + | 
| Fnu4H I | + + + | 
| Fok I | none | 
| Fse I | + + + | 
| Fsp I | + + | 
| Hae II | + + + | 
| Hae III | + + + | 
| Hga I | + + + | 
| Hha I | + + | 
| Hinc II | + + | 
| Hind III | + + + | 
| Hinf I | + + | 
| HinP1 I | + + + | 
| Hpa I | + + + | 
| Hpa II | + + + | 
| Hph I | + + + | 
| Kas I | + + + | 
| Kpn I | + + + | 
| Mbo I | + + | 
| Mbo II | + + + | 
| Mfe I | + + | 
| Mlu I | + + | 
| Mly I | <center> + + +</center> | 
| Mnl I | + + + | 
| Msc I | + + | 
| Mse I | + + | 
| Msl I | + + + | 
| Msp I | + + + | 
| MspA1 I | + + + | 
| Mwo I | + + | 
| Nae I | + | 
| Nar I | + + | 
| Nci I | + + | 
| Nco I | + + + | 
| Nde I | + + | 
| NgoM IV | + + | 
| Nhe I | + + | 
| Nla III | + + + | 
| Nla IV | + + + | 
| Not I | + + + | 
| Nru I | + + | 
| Nsi I | + + + | 
| Nsp I | <center> + + +</center> | 
| PaeR7 I | + + | 
| PflF I | + + | 
| PflM I | + + | 
| Ple I | + + | 
| Pme I | + + | 
| Pml I | + + | 
| PpuM I | + + | 
| PshA I | + + | 
| PspG I | <center> + +</center> | 
| Pst I | + + + | 
| Pvu I | + + | 
| Pvu II | + + + | 
| Rsa I | + + + | 
| Rsr II | + + | 
| Sac I | + + | 
| Sac II | + + + | 
| Sal I * | + | 
| Sap I | + + | 
| Sau3A I | + + + | 
| Sau96 I | + + | 
| Sca I | + + | 
| ScrF I | + + + | 
| SexA I | <center> <font>none</font></center> | 
| SfaN I | + + | 
| Sfc I | + + + | 
| Sfi I | + + + | 
| Sfo I | <center> <font>+ + +</font></center> | 
| SgrA I | <center> <font>+ + +</font></center> | 
| Sma I | + + | 
| Sml I | + + + | 
| SnaB I | + + | 
| Spe I | + + + | 
| Sph I | + + + | 
| Ssp I | + + | 
| Stu I | + + | 
| Sty I | + + | 
| Swa I | <center> + + +</center> | 
| Taq I | + + | 
| Tfi I | + + + | 
| Tli I | <center> + + +</center> | 
| Tse I | + + + | 
| Tsp45 I | + + + | 
| Tsp509 I | + + + | 
| TspR I | + + | 
| Tth111 I | + + | 
| Xba I | + + + | 
| Xcm I | + + + | 
| Xho I | + + | 
| Xma I | + + | 
| Xmn I | + + + | 







