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Testing for Bacteria and Fungi

AimIn cases of gross contamination the naked eye may identify the presence of bacteria and fungi. However it is necessary to detect low-level infections by incubation of cell cultures and/or their pro ...

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Detection of Mycoplasma by Culture

AimDetection of mycoplasma by culture is the reference method of detection and has a theoretical level of detection of 1 colony-forming unit (cfu). However there are some strains of mycoplasma that ar ...

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Testing for Mycoplasma by Indirect DNA Stain (Hoechst 33258 stain)

AimDNA staining methods such as Hoechst staining techniques are quick with results available within 24 hours which compares favorably with 4 weeks for detection by culture. However the staining of cul ...

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Cell Cycles - Introduction

The onion root tip and the whitefish blastula remain as the standard introduction to the study of mitosis. The onion has easily observable chromosomes and the whitefish has one of the clearest views o ...

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CELL CYCLE ANALYSIS

PROPIDIUM IODIDE: The most commonly used dye for DNA content/cell cycle analysis is PROPIDIUM IODIDE (PI). It can be used to stain whole cells or isolated nuclei. The PI intercalates into the major gr ...

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DNA Cell Cycle

Solutions70% ethanol ribonuclease (100 µg/ml DNase free Sigma) propidium iodide ( 50 µg/ml in PBS)ProcedureHarvest cells. Spin at 1200 rpm for 5 minutes. Discard supernatant; add 1 ml ' fridge cold' 7 ...

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Cell Cycle Staining Protocol-DAPI

1. Harvest cells- wash 2X in PBS to get rid of serum proteins. 1200rpm 5 min2. Resuspend pellet (up to 3x106 cells) in 1.2 ml PBS (Ca and Mg free).3. Add 3.0 ml ice cold 95% EtOH dropwise while vortex ...

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Flow Cytometric Analysis of Cell Cycle

Fixation1) Collect 2 X 106 cells.2) Pellet cells by spinning at 1000 rpm 4°C for 5 minutes.3) Resuspend cell pellet in 1 ml of cold PBS.4) Fix cells by adding 4 ml of -20°C absolute ethanol.5) Store c ...

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Flow Cytometry of Fibroblast Nuclei for DNA content

MaterialsP.I. Solution: 4 mM Na3Citrate (0.118 g/100 mL)30 U/mL RNAseI (43 mg/100 mL)0.1% Triton-X100 (0.1mL/100 mL)50 µg/mL propidium iodide (5 mg/100 mL)ProcedureHarvest cells: Rinse with a subconfl ...

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A SENSITIVE METHOD FOR DETECTION OF APOPTOSIS BY SINGLE LASER FLOW CYTOMETRY

MATERIALS:1. 1 X PBS (PBSAz 1 X PBS e.g. Irvine Scientific CA containing 2% newborn calf serum and 0.1% sodium azide)2. 7-Amino-actinomycin D (7-AAD e.g. Calbiochem CA)3. Human AB serum heat-inactiv ...

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Detection Of Cell Viability And/Or Apoptosis By Flow Cytometry (FACS)

Viable cells are cells that when allowed to continue beyond the timepoint of examination will stay alive. Besides live and healthy cells cells in early stages of apoptosis may be considered viable as ...

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FACS Procedures for Apoptosis Detection

Materials: Hoechst 33258 (Sigma B-2883). stock: 10 mg/ml in dH20 (40) working dilution: 500µg/ml (50µl stock + 950µl PBS). 7-Amino-actinomycin (Sigma A-9400) stock: 200µg/ml in dH20 (40) 12x75mm snap ...

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Cell Sorting By FACS

Currently the Moflo instrument (Dakocytomation) is used to sort cells at the AECOM FACS facility.Sorting is performed by the person in charge at the facility.You need to book an appointment in advance ...

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ICBR Flow Cytometry Core Laboratory Paraformaldehyde Fixation of Cells

BackgroundThis fixation method is good for cells labelled by fluorochrome-conjugated antibodies to membrane antigens. It will stabilize the light scatter and labelling for up to to a week in most inst ...

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PREPARATION OF 2% FORMALDEHYDE STOCK SOLUTION (2 METHODS)

METHOD 1:Formaldehyde preservative � 2% formaldehyde solution in protein-free phosphate-buffered saline (PBS).Prepare as follows:Add 2 g paraformaldehyde powder (e.g. Sigma St. Louis MO) to 100 ml o ...

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CD3/ CD4 /CD8 T cell subset counts

DescriptionProcedure for CD3/ CD4 /CD8 T cell subset counts using CD3-FITC / CD4-PE / CD8-PECy5 antibody Procedure1. One 5 ml round bottom tube (Falcon) is taken per blood sample to be analyzed. The t ...

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Direct/Indirect Staining Protocol

Use this Protocol for Directly or Indirectly staining cells for Flow Cytometric Analysis 1) Dilute cells to 5x10^6 cells/mL2) Aliquot 100uL of cells per per tube (5x10^5 cells total)3) Add 20uL blocki ...

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Measurement of GFP Expression and DNA Content in Permeabilized Cells

ReagentsCells to be studied expressing green fluorescent protein (GFP). Note that the same cell type without GFP is needed as a control.1 X PBS2% Buffered formaldehyde solution (see recipe)70% Ethan ...

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Measurement of Green Fluorescent Protein Expression and DNA Content in Unfixed Cells

ReagentsCells to be studied expressing green fluorescent protein (GFP). Note that the same cell type without GFP is needed as control.Hoechst 33342 stock solution (1mg/ml) (see recipe)12 X 75 mm cul ...

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Protocol for intracytoplasmic staining of cytokines for FACS analysis

DescriptionProtocol for intracytoplasmic staining of cytokines for FACS analysis Procedure1) Prepare spleen lymph node or T cell clone cells as single cell suspension using erythrocyte lysis (water) o ...

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