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疾病及处理

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Immunoprecipitation and Blotting: The Visualization of Small Amounts of Antigens Using Antibodies and Lectins

The practical problems encountered when purifying and visualizing small amounts of antigens from complex cellular and protein mixtures are explored. Practical aspects and the relative advantages and disadvantages of immunoprecipitation and blotting, the two most commonly u ...

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Representational Difference Analysis of cDNA

In this chapter I describe the PCR-coupled subtractive hybridization technique of representational difference analysis of cDNA (cDNA RDA). cDNA RDA is based on the representational difference analysis (RDA) method previously described by Lisitsyn et al. 3, and can be used to identify ge ...

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Microarray Data Analysis and Mining

DNA microarray is an innovative technology for obtaining information on gene function. Because it is a high-throughput method, computational tools are essential in data analysis and mining to extract the knowledge from experimental results. Filtering procedures and statistical ...

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Expression Cloning

Expression cloning involves the selection of specific polypeptides, generated from a cDNA or genomic DNA library, based on certain characteristics of the expressed proteins, such as antibody or ligand binding, recognition by T-cells, function, or complementation of cell defects. He ...

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Application of Single-Cell Cultures of Mouse Splenocytes as an Assay System to Analyze the Immunomodulatory Properties of Bacterial Components

Recently, various bacterial components have been suggested as initiating and modulating immune activation, thereby substantially affecting the complex and dynamic host/pathogen interactions. Herein, we present a valuable and simple methodology for determining the capa ...

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Determination of Epitopes by Mass Spectrometry

As a response to an infection, the immune system produces antibodies. The determination of the antigenic structure recognized by the antibody through epitope mapping provides information about the interaction between antigen and antibody for the diagnosis of a disease on a molecular l ...

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Identification of T-Cell Epitopes Using ELISpot and Peptide Pool Arrays

Here we describe a method for T-cell epitope identification using a modified ELISpot assay that is both simple and efficient. By using a carefully constructed array of pools of overlapping peptides spanning the entire antigen sequence to stimulate T-cell responses, we are able to detect anti ...

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High-Throughput Expression and Purification of 6xHis-Tagged Proteins in a 96-Well Format

By using automation and affinity-tag technologies, analysis of the large number of ORFs generated by genome-sequencing projects is greatly accelerated. Protocols describing culture of E. coli in automation-compatible formats and subsequent microto large-scale automated p ...

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Codon-Optimized Genes that Enable Increased Heterologous Expression in Mammalian Cells and Elicit Efficient Immune Responses in Mice after Vaccination

Many of the problems related with mammalian gene expression, such as low translation efficiency and mRNA halflife, can be solved by means of a rational gene design, based on modern bioinformatics, followed by the de novo generation of a synthetic gene. Moreover, high expression rates and prolon ...

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Purification of Recombinant Proteins with High Isoelectric Points

The use of recombinant antigens is essential for the construction of robust and sensitive diagnostic assays. A critical step in the preparation of recombinant antigens is protein purification. Purification problems may be very different for related structural proteins expressed ...

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Purification and Immunological Characterization of Recombinant Antigens Expressed in the Form of Insoluble Aggregates (Inclusion Bodies)

This chapter describes a straightforward protein purification strategy for the specific separation of insoluble recombinant proteins (so-called “inclusion bodies”) located in the E. coli cytoplasm and their subsequent recovery in form of soluble recombinant proteins. Opti ...

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Refolding of Inclusion Body Proteins

Genome sequencing projects have led to the identification of an enormous number of open reading frames that code for unknown proteins. Elucidation of the structure and function of these proteins makes it necessary to produce proteins fast, in high yields and at low cost. The recombinant expre ...

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Small-Molecule-Protein Conjugation Procedures

Small-molecule-protein conjugates are often required to act as immunogeneic complexes in the production of both monoclonal and polyclonal antibodies against small antigens. When antibodies have been obtained, they (and/or the small antigens) need to be labeled to facilitate their ...

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Structural Characterization of Proteins and Peptides

The primary structure of proteins is nowadays determined by DNA sequencing, and a variety of genomes are already known. Nevertheless, protein sequencing/identification is still indispensable to analyze the proteins expressed in a cell, to identify specific proteins, and to determi ...

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Determination of Kinetic Data Using Surface Plasmon Resonance Biosensors

The use of biosensors employing surface plasmon resonance (SPR) provides excellent instrumentation for a label-free, real-time investigation of biomolecular interactions. A broad range of biological applications including antibody-antigen interactions can be analyz ...

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Affinity Measurements of Biological Molecules by a Quartz Crystal Microbalance (QCM) Biosensor

We present a immunosensing system based on a quartz crystal microbalance (QCM) that allows detection and evaluation of a broad range of molecules relevant to medicine and biology. Soluble analyte is applied by injection into a flow-through chamber where receptor molecules are immobili ...

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Susceptibility Testing Methods of Antifungal Agents

Several methods for testing antifungal susceptibility are currently utilized. Minimum inhibitory concentrations can be tested using standardized noncommercial or commercial tests. Fungicidal testing includes either in vitro methods, such as time-kill or minimum fungic ...

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CARE-2 Fingerprinting of Candida albicans Isolates

The emergence of resistance to antifungal drugs in medically important fungi has become a significant problem in recent years. Probably the best-studied example is the development of resistance to the widely used antifungal agent fluconazole in the yeast Candida albicans. The availa ...

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Deoxyribonucleic Acid Fingerprinting Methods for Candida Species

A number of genetic fingerprinting methods have evolved to analyze the population structure and to perform epidemiological and etiological studies of infectious fungi. These methods include multilocus enzyme electrophoresis, restriction fragment-length polymorphi ...

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Application of Proteomic Analysis to the Study of Azole Antifungal Resistance in Candida albicans

The sequencing of the Candida albicans genome and recent refinements in protein resolution and identification techniques have greatly enhanced the application of proteomics for the study of this fungal pathogen. Proteome analysis includes the separation and isolation of prote ...

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