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神经生物学

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MuSK: A Kinase Critical for the Formation and Maintenance of the Neuromuscular Junction

Muscle-specific kinase (MuSK) is a RTK that is specifically expressed in skeletal muscle fibers and critical for the formation and maintenance of the neuromuscular junction (NMJ), a peripheral synapse formed between motoneurons and muscle fibers (1, 2). The acetylcholine receptors ( ...

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Cortical Neurons Culture to Study c-Jun N-Terminal Kinase Signaling Pathway

Excitotoxicity via N-methyl-d-aspartate receptors (NMDA-r) is a key mechanism of neurodegeneration following ischemia and other brain pathologies. We here describe the use of a fast, reliable and easily reproducible in vitro model of excitotoxicity induced with NMDA stimulation ...

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Large-Scale Protein Phosphorylation Analysis by Mass Spectrometry-Based Phosphoproteomics

Protein phosphorylation is one of the key mechanisms controlling cellular signaling networks. Due to the low abundance of phosphorylated proteins and weaker ionization efficiency of phosphopeptides during mass spectrometric analyses, it is highly required to remove abundant ...

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Phos-tag Affinity Electrophoresis for Protein Kinase Profiling

Protein kinase profiling can provide a basis for understanding the molecular origins of diseases and, potentially, for developing tools for therapeutic intervention. It is therefore very important to develop advanced experimental procedures for convenient and accurate dete ...

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Visualization of Protein Kinase Activities in Living Cells

Protein kinases are key modulators of intracellular signal transduction cascades, which determine various events in neuronal cells such as replication and differentiation. For many years, protein kinases were �analyzed mostly by biochemical methods, which could handle the cel ...

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Utilizing the Zebrafish Neurophenome Project (ZNP) Database for Analyses of Complex Neurophenotypes in Zebrafish Models

As the rate of biomedical discovery is rising exponentially, electronic databases have become particularly effective in organizing and sharing scientific knowledge. Due to a well-characterized genome, robust behavioral responses and physiological similarity to humans, t ...

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Western Blotting Assay for Egr-1 Immediate Early Gene in Brain Tissue of Zebrafish Applied to Neuroethological Study

Egr-1 (also known as zif268, Krox-24, NGFI-A, and ZENK) has been one of the most widely immediate early genes used to map specific neuronal populations activated during behavior in mammals and birds. However, the use of egr-1 mapping technique in nontraditional model systems depends on the evolut ...

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Rapid Method for Acute Intracerebroventricular Injection in Adult Zebrafish

The technique of intracerebroventricular (i.c.v.) injection is a useful neuroethological tool for studying the central actions of drugs on behavior of conscious animals because many drugs do not cross the blood–brain barrier, which limits the extent of drug action to the CNS. In this chapter ...

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Assessing Epilepsy-Related Behavioral Phenotypes in Adult Zebrafish

Over the past decades, zebrafish have been presented as a novel and valuable tool for modeling complex human diseases. Epilepsy is a serious brain disorder with multiple genetic and environmental causes. Our poor understanding of its pathogenesis requires novel paradigms and model org ...

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QTL Mapping Using Behavioral Traits in the Adult Zebrafish

This protocol provides an overview for performing a complete quantitative trait loci mapping experiment using the zebrafish, with an aim to use it to dissect a behavioral trait. This protocol covers the selection of the behavioral assay, the breeding design of the experiment, the generation ...

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Assessing Startle Responses and Their Habituation in Adult Zebrafish

Zebrafish is rapidly becoming a popular model species for neurobehavioral and psychopharmacological research. The startle response represents the instinctive, evolutionarily conserved reaction of an organism to novel unexpected and/or aversive stimuli. While startle t ...

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Assessing Habituation Phenotypes in Adult Zebrafish: Intra- and Inter-Trial Habituation in the Novel Tank Test

Although adult zebrafish are increasingly utilized as a model organism in neurobehavioral research, their habituation responses have only recently been evaluated in detail. When exposed to a novel environment, zebrafish demonstrate marked habituation responses, similar to t ...

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Assessing Learning and Memory Through the Active Avoidance Paradigm

Active avoidance conditioning in goldfish is a well-established behavioral paradigm to study learning and memory. Using active avoidance conditioning, investigators have discovered a good deal about learning and memory in goldfish. The behavioral methods and findings with gol ...

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Cued Fear Conditioning in Zebrafish (Danio rerio)

This protocol describes the cued fear conditioning task, designed to test the acquisition of the association between a fearful stimulus (unconditioned stimulus, US) and a cue (conditioned stimulus, CS) in zebrafish (Danio rerio). Here we use electrical shock as a US, and red light as a CS, both of whi ...

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Measuring Effects of Psychostimulants on Egocentric Spatial Learning and Memory in Adult Zebrafish

A brief summary of teleost spatial navigation research is followed by a description of a paradigm for the evaluation of egocentric-based, or viewpoint-dependent, spatial learning and memory function in zebrafish. The three-axis maze and testing protocol are used to evaluate the effects ...

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Assessing Social Behavior Phenotypes in Adult Zebrafish: Shoaling, Social Preference, and Mirror Biting Tests

Zebrafish are a popular model organism in neuroscience research, recently emerging as an excellent species to study complex social phenotypes. For example, zebrafish actively form shoals, which can be used to quantify their shoaling behaviors. Zebrafish also display strong social p ...

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Automated Tracking of Zebrafish Shoals and the Analysis of Shoaling Behavior

Zebrafish spend the majority of their time in groups, called shoals. Shoaling behavior is complex and dynamic: fish leave and rejoin the shoal, distances between shoal-members oscillate, and the speed and polarization of the shoal change on timescales of seconds to minutes. All these featur ...

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A High-Throughput and Inexpensive Assay for Anxiety-Related Behaviors in the Zebrafish, Based on Place Preference and Latency to Feed

In this protocol, we describe a high-throughput and inexpensive assay for anxiety-related behaviors in zebrafish. The behavioral observations occur while fish are housed individually in 1-L tanks commonly found in commercial zebrafish rearing systems. Behavioral indices incl ...

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Ca2+/Calmodulin-Dependent Protein Kinase II (CaMKII)

The Ca2+/calmodulin (CaM)-dependent protein kinase II (CaMKII) is a major regulator of synaptic �plasticity. CaMKII function depends on complex regulation of its activity and localization by Ca2+/CaM and several auto-phosphorylation reactions. Auto-phosphorylation at T286 ...

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Electrophysiological Technique for Analysis of Synaptic Function of PKN1 in Hippocampus

PKNs are serine/threonine protein kinases that have conserved catalytic domains homologous to those of protein kinase C (PKC) family members and regulatory regions containing antiparallel coiled-coil (ACC) domains and C2-like domains. PKN1 in particular is abundant in the brain, a ...

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