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Production and Use of Nonradioactive Hybridization Probes

Molecular hybridization is a useful technique for identifying specific target sequences even when they are present as a single copy in a complex population. It can be performed either on a solid matrix on which pure DNA (or RNA) is bound (blot hybridization) or on tissue sections (in situ hybridiza ...

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Chromosomal Mapping of Genes by Nonisotopic In Situ Hybridization

With the advent of nonradioactive labels, in situ hybridization (ISH) has become a useful technique for the detection of viral DNA in infected tissue (1), mRNA expression (2), sex determination (3), human gene mapping (4), and interphase cytogenetics (5–8). For chromosomal mapping of genes by ISH, ...

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Nonisotopic In Situ Hybridization: Immunocytochemical Detection of Specific Repetitive Sequences on Chromosomes and Interphase Nuclei

The term in situ hybridization describes a wide range of techniques concerned with the detection of DNA or RNA sequences within individual cells, tissues, or on identifiable regions of chromosomes. The technique utilizes an ability to label DNA or RNA probes so that, following hybridization ...

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An Immuno-Slot-Blot Assay for Detection and Quantitation of Alkyldeoxyguanosines in DNA

The detection and quantitation of DNA adducts plays a central role in the determination of dose-response relationships for chemical carcinogens, mutagens, and chemotherapeutic agents in experimental laboratory investigations. Furthermore, it serves in molecular dosime ...

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Production of Monoclonal Antibodies for the Detection of Chemically Modified DNA

Monoclonal antibodies that are specific for sites of base modification in DNA have a number of applications in, for example, studies of carcinogenesis, drug action, or DNA repair (1). The production of antibodies of the appropriate specificity entails practical considerations that are s ...

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Immunoaffinity Purification and Quantification of Antibody-Toxin Conjugates

Cytotoxic antibody-toxin conjugates made using antibodies and ribs some-inactivating proteins (RIPs) are prepared using chemical crosslinking methods (1,2 and this vol., Chapter 31). Gel permeation chromatography is used as a first step to purify conjugate molecules from the reac ...

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Preparation of Cytotoxic Antibody-Toxin Conjugates

Conjugates of antibodies with plant toxins, such as ricin and abrin, are potent cytotoxic agents that selectively eliminate target cells from mixed cell cultures in vitro, and have great promise as antitumor agents in cancer therapy (1). Ricin and abrin are protein toxins consisting of two dif ...

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Twin-Site ELISAs for fos and myc Oncoproteins Using the AMPAK System

Twin-site ELISA is a simple technique for quantitation of specific proteins in cell or tissue extracts. The application of this method to fos and myc oncoproteins is described. There are two basic procedures: 1. Extraction of fos and myc proteins from biological material in a form suitable for imm ...

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Efficient Elution of Purified Proteins from Polyvinylidene Difluoride Membranes (Immobilon) After Transfer from SDS-PAGE and Their Use as Immunogens

The great analytical power of sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) makes it one of the most effective tools of protein chemistry and molecular biology. In the past, there have been many attempts to convert the technique from analytical to preparative s ...

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Screening of gt11 cDNA Libraries Using Monoclonal Antibodies

The screening of a λgt11 library with monoclonal antibodies described here is a relatively uncomplicated procedure, but it requires a little introduction nevertheless. For simplicity, it is assumed that you have in your possession a library that is ready to screen, i.e., either a library boug ...

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Expression of Foreign Genes in Mammalian Cells Using an Antibody Fusion System

Whereas the expression of foreign genes in mammalian cells usually proves successful, the purification of gene products is often a difficult and time-consuming process. The availability of monoclonal antibodies to the foreign protein can greatly assist in small scale purification, ...

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Purification of Immunoglobulin G (IgG)

Several immunological procedures can be successfully carried out using nonpurified antibodies, such as unfractionated antisera, or ascitic fluid/culture supernatant containing monoclonal antibodies (MAbs). However, a much “cleaner” result can often be obtained if some fo ...

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Preparation of Rat Lung Cells for Flow Cytometry

Morphologically, the lung is a complex organ containing over 40 different cell types (1). Although species and strain dependent, in the Fischer rat, the most common cell types include: endothelial, 33%; Type I, 6.5%; Type II, 12%; macrophages, 8%; ciliated and nonciliated bronchiolar epithelial ( ...

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Cell Preparation for Flow Cytometry

For flow cytometry, a suspension of single cells, free of large clumps and excess debris, is essential. The quality of the data obtained depends as much on the quality of the preparation as on that of the flow cytometer.

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The Isolation of Rat Hepatocytes for Flow Cytometry

The isolation and subsequent study of hepatocytes in in vitro conditions was first transformed by Berry and Friend (1), who developed a collagenase liver perfusion method, allowing the isolation of large numbers of cells with high viability.

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Cell Sorting Using Immunomagnetic Beads

Immunomagnetic beads are uniform, polymer particles coated with a polystyrene shell that provides both a smooth hydrophobic surface to facilitate physical absorption of molecules, such as antibodies, and surface hydroxyl groups that allow covalent chemical binding of other bio ...

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An Immunochemical Assay for Detecting Transition of B-DNA to Z-DNA

The enzyme immunoassay technique described below is a simple and sensitive method to detect left-handed Z-DNA formation in synthetic polynucleotides, recombinant plasmids, and native DNAs. This method utilizes the differences in the antigenic properties of right-handed B-DNA a ...

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Sensitive Competitive Enzyme-Linked Immunoassay for Quantitation of Modified Bases in DNA

A widely used configuration for competitive enzyme-linked immunosorbent assay (ELISA) of modified regions in polymeric DNA involves competition between a standardized quantity of antigen bound to the assay well and a variable quantity and/or quality of antigen in solution. These are ...

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Fluorescent Protein Staining on Nitrocellulose with Subsequent Immunodetection of Antigen

The transfer of proteins from gels to nitrocellulose or other immobilizing matrices has become increasingly popular as a powerful tool for the subsequent analysis of proteins. Most frequently, the blotted proteins are analyzed for their antigenic properties by Western blotting.

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Colloidal Gold Staining and Immunodetection in 2-D Protein Mapping

This chapter extends the use of the technique described in the previous chapter to two-dimensional (2D) protein gels, as well as containing some alternatives and modifications to the method.

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