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Generation of Rabbit Immune Libraries

Rabbits provide an interesting alternative to antibodies derived from the murine system. Furthermore, rabbits show an exceptional feature with respect to the mechanisms that are used for the generation of antibody diversity, i.e. a single VH gene that is preferentially used, and the diver ...

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Immune Libraries from Nonhuman Primates (NHP)

Libraries constructed from immunised non human primates (NHP; macaques here) are an appealing alternative to human libraries when immunization of Humans is difficult, as is so often the case. These phage-displayed libraries allow to obtain antibody fragments of very high affinities ( ...

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Synthetic Antibody Libraries

Antibody fragments have gained strong attention in the last years and presumably represent one of the most promising molecules to construct new types of therapeutic proteins. Contrary to complete IgG, antibody fragments like scFv are not very stable and are frequently expressed at a very low ...

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Human Antibody Gene Libraries

The quality of antibodies selected from antibody gene libraries, in particular their affinity and the number of different clones per antigen, is a direct function of library diversity. Here, the optimization of every single step during library construction is of utmost importance for the q ...

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Mouse Immune Libraries for the Generation of ScFv Fragments Directed Against Human Cell Surface Antigens

Antibody phage display libraries have frequently been used for the isolation of antibody fragments against potential target structures on the cell surface of different types of cancer. Independent from the source of V-regions and the antibody format, two general strategies have been f ...

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Construction of scFv Fragments from Hybridoma or Spleen Cells by PCR Assembly

Although nowadays many different libraries for the selection of antibodies are available, hybridoma cells and immunized animals are still an important source for the production and selection of specific binders. Therefore, this protocol describes the isolation of the coding mRNA, P ...

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Coning Hybridoma cDNA by RACE

Hybridoma cDNA can be difficult to clone using V region PCR. This is due to mutations in primer regions as well as the presence of other expressed V genes in the hybridoma. In this chapter, the use of RACE to clone V genes is described. This avoids some of the problems associated with the use of V gene PCR.

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Cloning of Variable Domains from Mouse Hybridoma by PCR

Some hybridoma cell lines are very low producers, difficult to cultivate, or antibody production is lost upon prolonged culture. In these cases, a recombinant "hybridoma immortalization" can rescue a valuable antibody for further unlimited propagation in E. coli or other recombinant p ...

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B Cell Helper Assays

Activation, proliferation and differentiation of na�ve B lymphocytes into memory B cells and plasma cells requires engagement of the B cell receptor (BCR) coupled to T-cell help (1, 2). T cells deliver help in cognate fashion when they are activated upon recognition of specific MHC–peptide com ...

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transkingdom RNA Interference (tkRNAi): A Novel Method to Induce Therapeutic Gene Silencing

RNA interference is a phenomenon in which specific, endogenous genes are silenced by mRNA degradation. This technology is highly regarded as a potential therapeutic due to its high efficacy and low toxicity. However, the difficulty of delivering RNAi to target cells has impeded the develop ...

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Flow Cytometry and Cell Activation

Flow cytometry is combined with highly specific fluorophore-conjugated antibodies that will only bind to the activated forms of molecules. The advances in flow cytometry enable to perform quantitative multiplexed analysis of single cells within heterogeneous populations st ...

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Generation of Human T Cell Clones

Peripheral blood T lymphocytes are a pool of cells with extremely different characteristics and, therefore, it may be difficult to obtain clear-cut results and to attribute a certain function to a defined T cell population in several experimental settings. The availability of a population ...

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Investigating T Cells by Polychromatic Flow Cytometry

Since its development, flow cytometry gave a relevant contribution to the field of Immunology. Its unique potential to analyse multiple parameters at the single cell level allowed the identification of unknown cell subsets with specific roles in immunoregulation as well as in the pathog ...

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T Cell Epitope-Mapping by Cytokine Gene Expression Assay

The following method describes the identification of candidate immunogenic peptides through their ability to recall an immune T-cell activation from peripheral blood mononuclear cells (PBMCs) of individuals with defined HLA–peptide restrictions that have been previously ...

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Limiting Dilution Analysis of Antigen-Specific T Cells

Limiting dilution analysis (LDA) has been extensively employed as a quantitative method to estimate the precursor frequency of various T lymphocyte subsets according to their functional properties in vitro. We describe here an example of LDA experiment assessing antigen-specif ...

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Cytokine Multiplex Immunoassay: Methodology and (Clinical) Applications

Subsets of T cells can be distinguished on basis of their cytokine production and secretion profile. With the critical role of cytokines in the regulation of immune and inflammatory responses, cytokines hold the promise to become the ideal biomarkers to monitor development and progressi ...

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Hydrodynamic Delivery Protocols

RNA interference (RNAi) holds considerable promise as a novel therapeutic strategy to silence disease-causing genes not amenable to conventional therapeutics. Since it relies on small interfering RNAs (siRNAs), which are the mediators of RNAi-induced specific mRNA degradatio ...

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Preventing Tissue Injury Using siRNA

RNA interference (RNAi) is a process through which double-stranded RNA induces the activation of endogenous cellular pathways of RNA degradation, resulting in selective and potent silencing of genes that have homology to the double strand. Much of the excitement surrounding small int ...

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Measuring Intracellular Calcium Signaling in Murine NK Cells by Flow Cytometry

This chapter describes a method by which activating receptor-mediated calcium signaling can be measured in individual murine NK cells using a flow cytometer fitted with a UV laser. One major advantage of this method is that the calcium response of the minority NK cell population and even smaller ...

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Intracellular Staining for Analysis of the Expression and Phosphorylation of Signal Transducers and Activators of Transcription (STATs) in NK Cells

Cytokines stimulate biological responses by activating intracellular signaling pathways. We have been adapting flow cytometric techniques to measure the levels of expression and activation of signaling molecules within mixed populations containing NK cells and to charac ...

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