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Neurotrophin Immunohistochemistry in Peripheral Tissues

Neurotrophins are required by a variety of neuronal types for their survival during development and for the maintenance of normal function in mature animals. Within the nervous system, the neurotrophins are synthesized in limited amounts in postsynaptic cells, glia, or neurons. Within ...

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Extraction and Quantification of the Neurotrophins

Neurotrophins are a family of neuronal survival and differentiation factors (1,2). The mammalian neurotrophin family consists of four members sharing 50–55% amino acid identity: nerve growth factor (NGF), brain-derived neurotrophic factor (BDNF), neurotrophin 3 (NT-3), and NT-4/5 ( ...

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Identifying Novel Proteins in Nervous Tissue Using Microsequencing Techniques

Identifying signaling molecules that participate in pathways leading from receptor activation to changes in gene expression in cells is the fundamental focus of many research endeavors. For example, neurotrophins interacting with their trk receptors mediate a number of cellular ...

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Aquatic Light/Dark Plus Maze Novel Environment for Assessing Anxious Versus Exploratory Behavior in Zebrafish (Danio rerio) and Other Small Teleost Fi

Initial introduction into novel environments produces in zebrafish behaviors consistent with predator evasion, fear, and/or anxiety. This protocol is for a light/dark plus maze novel environment test utilizing two elements of those behavioral responses, thigmotaxis and light a ...

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A Simple and Effective Method to Condition Olfactory Behaviors in Groups of Zebrafish

We describe a simple assay for studying and conditioning olfactory behaviors of adult zebrafish. The apparatus consists of a circular flow-through tank into which odorants can be administered in a controlled fashion. Odorants (conditioned stimuli; CS) are repeatedly paired with food ...

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Zebrafish Conditioned Place Preference Models of Drug Reinforcement and Relapse to Drug Seeking

This protocol details simple zebrafish conditioned place preference assays for assessing reinforcing properties of drugs of abuse such as ethanol, which can be administered to the tank water. We further describe a conditioned place preference assay of stimulus-induced reinstat ...

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Modified Associative Learning T-Maze Test for Zebrafish (Danio rerio) and Other Small Teleost Fish

Associative learning is a form of classical (Pavlovian) conditioning in which a neutral stimulus (e.g., the color green) is paired with a stimulus of some significance to an animal (e.g., food), such that for the animal, the color becomes synonymous with food to evoke the same innate, reflexive behavi ...

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Quantifying Anti-predator Responses to Chemical Alarm Cues

A behavioral assay of responses to chemical alarm cues can be used to test for cognitive functions related to olfaction, learning, and memory. Alarm cues are chemicals released from damaged epithelial tissue. These cues indicate the presence of predation risk because they are released only a ...

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Automated Imaging of Avoidance Behavior in Larval Zebrafish

This protocol describes the construction of an automated imaging system and two assays for measuring avoidance behaviors in larval zebrafish. The first assay, called the “bouncing ball assay,” measures the response of larvae to a threatening stimulus displayed on an LCD screen. The second ...

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Videograms: A Method for Repeatable Unbiased Quantitative Behavioral Analysis Without Scoring or Tracking

We present a method that complements both scoring by observers and automated tracking methods for quantifying behaviors. Based on standard motion enhancement, our algorithm converts a behavioral video recording into a single image (‘videogram’) that maps the spatial distribution ...

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Video-Aided Analysis of Zebrafish Locomotion and Anxiety-Related Behavioral Responses

Due to physiological and anatomical similarities to other vertebrates, zebrafish are becoming a widely used model in neurobehavioral research. With the growing popularity of zebrafish as experimental subjects, it is important to develop tools that accurately record their behav ...

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Deconstructing Adult Zebrafish Behavior with Swim Trace Visualizations

Three-dimensional reconstruction is a method of qualifying the behavioral activity of several animals including mice, rats, and zebrafish. This method allows for measuring behavioral endpoint data on two types of tracking planes (temporal and spatial). Temporal tracking measur ...

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Assessing the Maximum Predictive Validity for Neuropharmacological Anxiety Screening Assays Using Zebrafish

The development of reliable pharmacological screening assays is an important task. However, it is based upon the ability of animal models, such as the zebrafish, to demonstrate predictive validity for a specific set of drug classes. A popular assay used for this purpose is the novel tank diving pa ...

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Intraperitoneal Injection as a Method of Psychotropic Drug Delivery in Adult Zebrafish

Zebrafish behavioral phenotypes are often evaluated in response to pharmacological modulation by various psychotropic drugs. An important step in this process is the method of drug administration. While the most popular drug administration technique in zebrafish research is by i ...

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Neurophenotyping of Adult Zebrafish Using the Light/Dark Box Paradigm

The light/dark box test, traditionally used to quantify rodent anxiety-like behavior, has recently been applied to the adult zebrafish (Danio rerio). Utilizing the fish’s scototaxis (aversion to bright areas and natural preference for the dark), this paradigm can be used to assess levels of ...

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Phenotyping of Zebrafish Homebase Behaviors in Novelty-Based Tests

Various novelty-based assays used to quantify zebrafish (Danio rerio) behavior show a striking similarity to behavioral responses in rodents. Exposed to the open field test, zebrafish establish overt homebases demonstrating clear preference for a particular area of the tank. This b ...

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Measuring Endocrine (Cortisol) Responses of Zebrafish to Stress

The zebrafish (Danio rerio) is rapidly becoming a popular model species in stress and neuroscience research. Their behavior, robustly affected by environmental and pharmacological manipulations, can be paralleled by physiological (endocrine) analysis. Zebrafish have a hypo ...

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Measuring Agonistic Behavior in Zebrafish

Adult zebrafish (Danio rerio) are territorial, show aggressive behavior, and establish dominant-subordinate hierarchies. Here, a protocol for a standard opponent setup is described, which enables the identification, characterization, and quantification of agonistic ac ...

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Quantification of mRNA Levels Using Ribonuclease Protection Assay

Several methods are available for the quantification of neurotrophin mRNA levels. This chapter describes the RNAse protection assay (RPA) first publishcd by Zinn and co-workers (1) and developed further by Melton and co-workers (2). In this method, a radioactively labeled antisense RNA p ...

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Quantification of Neurotrophin mRNA by RT-PCR

Neurotrophin mRNAs are expressed at a wide variety of levels in many types of neurons and nonneuronal cells both within the central and peripheral nervous systems as well as in cells unrelated to neuronal function (1–6). However, in mature animals, most tissues synthesize neurotrophin mRNAs ...

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