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Qualitative and Quantitative Analyses of Phospholipids by LCMS for Lipidomics

In this chapter we are going to mention about three different approaches in lipidomics and how to effectively profile or calculate the amounts of phospholipids from major molecular species up to minor ones. 1) Precise identi

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Lipidomic Analysis of Prostanoids by Liquid ChromatographyElectrospray Tandem Mass Spectrometry

Lipidomics aim to generate qualitative and quantitative information on different classes of lipids and their species, and when applied in conjunction with proteomic and genomic assays, facilitate the comprehensive study of lipid metabolism in cellular, organ, or body systems. Adv ...

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A Novel Role for Nutrition in the Alteration of Functional Microdomains on the Cell Surface

Membrane rafts are ordered microdomains of the plasma membrane consisting of cholesterol, sphingolipids, and saturated fatty acids which appear to regulate many cellular signaling pathways. One such type of membrane raft is caveolae, which are cave-like invaginations of the plasma ...

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Lipid Geographical Analysis of the Primate Macula by Imaging Mass Spectrometry

Imaging mass spectrometry (IMS) provides a unique method to probe for chemical distributions within tissue sections with high chemical specificity. The direct analysis of tissue sections by mass spectrometry, which is the field of IMS, is relatively young, 10 year old; however, the techni ...

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Lipidomic Analysis of Human Meibum Using HPLCMSn

High-pressure liquid chromatography–mass spectrometry (HPLC–MS) has become a de facto standard analytical tool in lipidomic analyses of complex biological samples. This technique offers the best combination of selectivity and sensitivity among the currently available an ...

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Lipidomic Analysis of Biological Samples by Liquid Chromatography Coupled to Mass Spectrometry

Lipidomics studies the large-scale changes in nonwater-soluble metabolites (lipids) accompanying perturbations of biological systems. Because lipids are involved in crucial biological mechanisms, there is a growing scientific interest in using lipidomic approaches to ...

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Combining Lipidomics and Proteomics of Human Cerebrospinal Fluids

Lipids from dietary sources or from de novo synthesis are transported while bound to proteins to other tissues where they are used for cell membrane synthesis or stored for energy generation. In cell membranes or in plasma, lipids can undergo several modifications that are important in cell fun ...

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Global Analysis of Retina Lipids by Complementary Precursor Ion and Neutral Loss Mode Tandem Mass Spectrometry

Despite an increasing recognition of the causative and diagnostic role of lipids in the onset and progression of retinal disease, information on the global lipid profile of the normal retina is quite limited. Here, a “shotgun” tandem mass spectrometry approach involving the use of multiple l ...

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Tracking the Glycerophospholipid Distribution of Docosahexaenoic Acid by Shotgun Lipidomics

Docosahexaenoic acid (DHA, 22:6 n-3) is an omega-3 fatty acid with a 22 carbon acyl chain containing six cis double bonds and is predominantly found in membrane glycerophospholipids. Dietary consumption of DHA has been positively linked with the prevention of numerous pathologies and cons ...

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Examination of the Brain Mitochondrial Lipidome Using Shotgun Lipidomics

Contamination from subcellular organelles and myelin has hindered attempts to characterize the lipidome of brain mitochondria. A high degree of mitochondrial purity is required for accurate measurements of the content and molecular species composition of mitochondrial lip ...

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Brain Phosphoinositide Extraction, Fractionation, and Analysis by MALDI-TOF MS

Matrix-assisted laser desorption and ionization time-of-flight (MALDI-TOF) mass spectrometry (MS) can provide rapid, sensitive determinations of lipids from small tissue samples in both single determinations and automated high-throughput assays. MALDI-TOF MS is a sensiti ...

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HPLC/MS/MS-Based Approaches for Detection and Quantification of Eicosanoids

Eicosanoids are oxygenated, endogenous, unsaturated fatty acids derived from arachidonic acid. Detection and quantification of these compounds are of great interest because they play important roles in a number of significant diseases, including asthma, chronic obstructive ...

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Lipidomics of the Red Cell in Diagnosis of Human Disorders

Applications of tandem mass spectrometry in the field of lipid clinical chemistry are considered. Haemato�logical and biochemical advantages are presented favoring the choice of red blood cell membranes as a starting material in a wide variety of biomedical fields. Practical consi ...

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Detection of Herpes Simplex Virus Dependent Apoptosis

Subversion of the host response to virus infection is a universal theme of virology and viral immunology. Multiple mechanisms are in place to limit virus spread on behalf of the host, yet through evolution, viruses have adapted to either weaken or eliminate the effects of these host factors. Cell de ...

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Detecting Apoptotic Cells and Monitoring Their Clearance in the Nematode Caenorhabditis elegans

Apoptosis is a genetically controlled process of cell suicide that plays an important role in animal development and in maintaining homeostasis. The nematode Caenorhabditis elegans has proven to be an excellent model organism for studying the mechanisms controlling apoptosis and ...

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Detection of Cell Death in Drosophila

Drosophila is a powerful model system for the identification of cell death genes and understanding the role of cell death in development. In this chapter, we describe three methods typically used for the detection of cell death in Drosophila. The TUNEL and acridine orange methods are used to dete ...

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Reliable Method for Detection of Programmed Cell Death in Yeast

Accumulating evidence suggests that yeasts are capable of undergoing programmed cell death (PCD) to benefit long-term survival of the species, and that yeast and mammals may share at least partially conserved PCD pathways. In our experience, mammalian apoptosis assays have not been rea ...

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Cell Death in Myoblasts and Muscles

One of the hallmarks of development is that many more cells are produced than are ultimately needed for organogenesis. In the case of striated skeletal muscle, large numbers of myoblasts are generated in the somites and then migrate to take up residence in the limbs and the trunk. A subset of these cells f ...

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Analysis of Apoptosis in Isolated Primary Cardiac Myocytes

Acute myocardial infarction represents the leading cause of morbidity and mortality in the western societies. Importantly, both apoptosis and necrosis of cardiomyocytes have been implicated in the pathomechanism of myocardial infarction. The simplest way to analyze apoptos ...

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Genetic Mapping of Anti-Apoptosis Pathways in Myeloid Progenitor Cells

In mammalian cells, apoptotic and anti-apoptotic pathways may be investigated using a variety of biochemical, molecular, and genetic approaches. Retrovirus mediated genetic screens have proven a powerful tool in mapping out the network of players in a number of signaling pathways. We ha ...

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