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In vitro Assays for Endothelial Cell Functions Related to Angiogenesis: Proliferation, Motility, Tubular Differentiation and Proteolysis

This chapter covers the breakdown of the process of angiogenesis into simple assays to measure discrete endothelial cell functions. The techniques described are suitable for studying stimulators or inhibitors of angiogenesis and determining which aspect of the process is modula ...

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Quantitative Estimation of Tissue Blood Flow Rate

Tissue blood flow rate (F) is a critical parameter for assessing functional efficiency of a blood vessel network following angiogenesis. This chapter aims to provide the principles behind estimation of F and a practical approach to its determination in laboratory animals using small, re ...

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The Sponge Implant Model of Angiogenesis

The host response observed after the application of an appropriate stimulus, such as mechanical injury or injection of neoplastic or normal tissue implants, has allowed the cataloguing of a number of molecules and cells involved in the vascularization of normal repair or neoplastic tiss ...

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In Vivo Matrigel Migration and Angiogenesis Assay

The search for rapid and reproducible in vivo angiogenesis and antiangiogenesis assays is an area of intense interest. These types of assays are extremely useful in testing putative drugs and biological agents and for the comparison and enhancement of in vitro tests. The Matrigel plug assay is ...

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The Dorsal Skinfold Chamber: Studying Angiogenesis by Intravital Microscopy

Intravital microscopy represents an internationally accepted and sophisticated experimental method to study angiogenesis, microcirculation, and many other parameters in a wide variety of neoplastic and nonneoplastic tissues. Since 1924, when the first transparent cham ...

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The Corneal Pocket Assay

Continuous monitoring of neovascular growth in vivo is required for the development and evaluation of drugs acting as suppressors or stimulators of angiogenesis. The cornea assay consists of the placement of an angiogenesis stimulus (tumor tissue, cell suspension, growth factor) in ...

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Use of the Hollow Fibre Assay for Studies on Tumor Neovasculature

In vivo preclinical assays are required to screen potential agents that target the tumor vasculature. Here, a hollow fibre-based assay for the quantification of neovasculature in the presence or absence of an agent that potentially targets tumor neovasculature is described. The neova ...

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The Use of In Vivo Microdialysis Techniques to Detect Extracellular ROS in Resting and Contracting Skeletal Muscle

Reactive oxygen species (ROS) are constantly produced by skeletal muscle and this production is increased during contractile activity. Understanding the role that ROS play in skeletal muscle requires an understanding of the species of ROS produced, the subcellular site of producti ...

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Zymographical Techniques for Detectionof Matrix Metalloproteinases

Matrix metalloproteinases (MMPs) are a family of zinc-dependent proteinases associated with extracellular matrix degradation, cellular migration, tissue remodeling, and angiogenesis. The activity of MMPs is regulated by the tissue inhibitors of metalloproteinases (TI ...

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Cell-Free Antibody Capture Method for Analysis of Detergent-Resistant Membrane Rafts

Cholesterol-rich microdomains present on the plasma membrane appear to play an important role in spatio-temporal regulation of cell signaling and cell adhesion processes. Compositional heterogeneity of these microdomains and their coalescence during cell–cell interact ...

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Dye Ligand Chromatography

Dye affinity chromatography is a purification technique offering unique selectivities and high purification factors. Dye ligands may act as substrate analogs, offering affinity interactions with their corresponding enzymes. This chapter describes a dye ligand chromatog ...

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Purification of Proteins Using Displacement Chromatography

Displacement chromatography has several advantages over the nonlinear elution technique, as well as the linear elution mode, such as the recovery of purified components at high concentrations, less tailing during elution, high throughput and high resolution. Displacer affinity ...

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Immobilized Metal Ion Affinity Chromatography of Histidine-Tagged Fusion Proteins

Immobilized Metal ion affinity chromatography (IMAC) is a ubiquitous technique in Modern recombinant production and purification. The wide range of expression vectors for the production of histidine-tagged recombinant proteins as well as the variety of stationary supports for ...

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Methods for the Purification of HQ-Tagged Proteins

The HQ (H = histidine, Q = glutamine) tag is a small fusion tag that can be isolated using immobilized metal affinity columns. HQ-tagged proteins can be expressed and purified from bacterial cells under native and denaturing conditions, mammalian cells, insect cells, wheat germ and rabbit retic ...

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Amylose Affinity Chromatography of Maltose-Binding Protein: Purification by both Native and Novel Matrix-Assisted Dialysis Refolding Methods

Maltose-binding protein (MBP) is a carrier protein for high level recombinant protein and peptide production from either the cytoplasm or periplasm of Escherichia coli. The affinity matrix for purifying MBP-passenger proteins utilizes amylose covalently attached to magnetic b ...

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Site-Specific Cleavage of Fusion Proteins

Where an affinity tag has served its purpose, it may become desirable to remove it from the protein of interest. This chapter describes the removal of such fusion partners from the intended protein product by cleavage with site-specific endoproteases. Methods to achieve proteolytic cleav ...

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Methods for Detection of ProteinProteinnl and ProteinDNA Interactions Using HaloTag

HaloTag™ is a protein fusion tag which was genetically engineered to covalently bind a series of specific synthetic ligands. All ligands carry two groups, the reactive group and the functional/reporter group. The reactive group, the choloroalkane, is the same in all the ligands and is involved ...

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The Use of TAGZyme for the Efficient Removal of N-Terminal His-Tags

The use of affinity tags and especially histidine tags (His-tags) has become widespread in molecular biology for the efficient purification of recombinant proteins. In some cases, the presence of the affinity tag in the recombinant protein is unwanted or may represent a disadvantage for the ...

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Rationally Designed Ligands for Use in Affinity Chromatography: An Artificial Protein L

Synthetic affinity ligands can circumvent the drawbacks of natural immunoglobulin (Ig)-binding proteins by imparting resistance to chemical and biochemical degradation and to in situ sterilization, as well as ease and low cost of production. Protein L (PpL), isolated from Peptostr ...

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Phage Display of Peptides in Ligand Selection for Use in Affinity Chromatography

Large repertoires of peptides displayed on bacteriophage have been extensively used to select for ligand-binding molecules. This is a relatively straightforward process involving several cycles of selection against target molecules, and the resulting ligands can be tailored ...

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