小鼠与人类肿瘤微环境组装差异研究

Differential assembly of mouse and human tumor microenvironments

作者信息Tristan Courau, Rebecca G Jaszczak, Bushra Samad, Emily Flynn, Nayvin W Chew, Gabriella C Reeder, Jessica Tsui, Semhar Teklu, Lomax F Pass, Austin W Edwards, Mohammad Naser, Arja Ray, Harrison Wismer, Daniel Bunis, Leonard Lupin-Jimenez, Noah V Gavil, David Masopust, John P Graham, Daniel A Skelly, Xavier Vesco, Edison T Liu, Gabriela K Fragiadakis, Alexis J Combes, Matthew F Krummel
PMID42156893
期刊Nat Immunol
发布时间2026-06
DOI10.1038/s41590-026-02505-7

摘要

Mouse models are frequently used to develop treatments for human cancer. However, the degree to which their tumor microenvironments (TMEs) are synonymously assembled is particularly poorly characterized. Through systematic immunoprofiling of 15 commonly used mouse models, we found that most murine TMEs recapitulate the composition of poorly infiltrated human tumors, extensively biased toward high macrophage densities. We discovered substantial species-specific biases of chemokine expression networks known to drive TMEs assembly, together with discoordinated frequencies of T and myeloid cell subtypes. Even with variable alignment, conserved cell-type-specific gene expression programs emerged across species and cohorts. Dissecting the coordinated T cell-myeloid gene expression programs revealed a conserved axis between interferon-responsive myeloid states and ongoing T cell cytotoxicity that transcends tissue of origin and predicts clinical outcome. Collectively, this work provides a practical atlas outlining both the hazards and opportunities of using mice to model human cancer.

实验方法

产品清单

名称品牌货号
Ventana BenchMark Ultra自动染色平台Roche Diagnostics--
Leica CM3050 S冷冻切片机LeicaCM3050 S
Leica Thunder显微镜Leica--
BD FACSAria II细胞分选仪BD BiosciencesFACSAria II
Illumina NovaSeq SP测序仪IlluminaNovaSeq SP
12孔板----
离心机----
CyTOF质谱流式细胞仪Fluidigm--
Maxpar偶联试剂盒Fluidigm--
EQ四元素校准微球Fluidigm--
Cell Conditioning 1溶液Ventana Medical Systems950-124
TissueTek OCT冷冻包埋剂Sakura Finetek--
Fluoromount G封片剂Thermo Fischer Scientific--
Zombie NIR活力染料----
Fc阻断剂Tonbo Biosciences--
HTO抗体BioLegendTotalSeq-A