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        Comparison of lysis methods

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        Comparison of lysis methods

        Sonication

        • most efficient method of cell fractionation
        • problem: heat build up which can denature proteins (proportionate to length of sonication)
        • precaution: do on ice and sonicate intermittantly

        material: ultrasonication bath or rods

        Homogenisation

        • best for animal tissue; less suitable for cells
        • precaution: do on ice to reduce heat build-up and denaturation

        material: drills (polytron), pestle/tube (dounce) bead beaters

        Freeze-thaw

        • least effective method
        • plus: does not denature proteins as much as other methods

        material: pestle and mortar, liquid nitrogen

        Detergents

        • chemical method of lysis
        • problems: detergent may inhibit subsequent reactions
        • problems: detergent may disrupts protein interactions

        no additional material required, just the chemicals and typical tubes

         

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