EWS Gene Fusions as Diagnostic Markers in Sarcomas: Principles and Guidelines
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Chromosomal translocatron |
Fusion product |
EWS forward primera |
Reverse primer |
Product size (bp) |
Internal and fusion Junction probes |
---|---|---|---|---|---|
Ewmg’s sarcoma/PNET |
|||||
t(ll.22)(q24,q12) |
EWS/FLII |
ex 7 |
FLII ex 9 ACTCCCCGTTGGTCCCCTCC |
type1 120 |
EWS ex 7 TATAGCCAACAGAGGAGCAG |
type2 183 |
FL11 ex 6 CAAGCTCCTCTTCTGACTGAG |
||||
ex 7 |
FLII ex 6 GITGAGGCCAGAATTCATGTTA |
type1 327 |
EWS/FLII type1 ACGGGCAGCAGAACCCTTCTTATG |
||
type 2 390 |
EWS/FLII type 2 ACGGGCAGCAGAGTTCACTGCTGG |
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t(21,22)(q22,q12) |
EWS/ERG |
ex 7 |
ERG ex 9 AAAGCTGGATCTGGCCACTG |
Various |
ERG AGTCGAAAGCTGCTCACCATCT |
Clear-cell sarcoma (MMSP) |
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t(l2,22)(q13,q12) |
EWS/ATFI |
ex 8 |
ATFI TCTCCGTCTCCTTTTCTGC |
126 |
EWS/ATFI CGGTGGAATGGGAAAAATTTTGAA |
Desmoplastlc SRCT |
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t(12,22)(pl3,q12) |
EWS/WTI |
ex 7 |
WTI ex 9 GACCAGGAGAACTTKGCTGAC |
197 |
EWS/WTI ACGGGCAGCAGAGTGAGAAACCAT |
Extraskeletal myxold CS |
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t(9,22)(q22,ql2) |
EWS/CHN |
||||
type 1 |
ex 12 |
CHN CCTGGAGGGGAAGGGCTAT |
109 |
EWS/CHN type 1 AATGGTTTGATGATATGCCCTGCG |
|
type 2 |
ex 7 |
CHN CCTGGAGGGGAAGGGCTAT |
275 |
EWSKHN type 2 ACGGGCAGCAGAAGCCCACTGCGG |