Embedding, Sectioning, and Mounting of Frozen Tissues
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Embedding, Sectioning, and Mounting of Frozen Tissues
	Chen-Ming Fan Lab,Carnegie Institute of Washington
	 
	Embedding of Frozen Tissues.
	Let PFA fixed embryos sink to the bottom of a tube containing a 30% sucrose (in
	PBS) solution overnight. After they have sunk, remove all but 2-3 mL's of the
	solution. Add an equal volume of O.C.T. to the tube, and place it on a gentle
	rocker for 1-2 hours to allow the embryos to equilibrate to the new solution. Get
	an appropriate number of embedding wells, and fill them to the line with O.C.T..
	Pipet in the desired number of embryos, minimizing the amount of
	sucrose/O.C.T. solution transfered, as pockets of sucrose solution may cause
	sectioning inconsistancies. Also, try not to create bubbles. Assemble and
	position the embryos as desired at the bottom center of the well. Once the
	embryos are positioned, quickly place the well in dry ice, making sure it is as
	level and upright as possible to minimize the possibility of the embryos shifting
	their position. Once they are frozen, place them in a pre-chilled Freeze-It
	container, and store them at -80°C until you are ready to section.
	Sectioning with the Leica Cryostat.
	The Cryostat is normally always on, but in sleep mode when not in use. Hold
	down the button until the green display backlight comes on. Press the
	light bulb button to turn on the cryostat's interior lights. Locate the sample
	mount (shaped like a large metal thumbtack with machined concentric circles in
	the top), and squirt a small dollop of OCT on the top surface. Break off the
	plastic well mold from your sample to be sectioned, and stick your sample to the
	sample mount. Place the mounted sample upright in the slot in the lower left
	inside the cryostat so that the OCT used to stick the sample to the mount freezes.
	When it has frozen, slide the protruding end of the sample mount into the slot
	on the moving head of the cryostat, and fix it in place by tightening down the
	knobs sticking out of the top and right side. Adjust the position of the sample's
	sectioning face so that it is parallel to the blade in both the X and Y planes. The
	hand wheel on the right side of the cryostat is used to move the sample up and
	down. The face of the sample is likely quite far (several mm's) from the blade.
	To rapidly advance the sample surface to the blade, adjust the Trim dial to 100 or
	150 microns, and press the trim button once (both controls located on the left
	center panel). A green light within the Trim button should illuminate. At this
	point you can manually turn the handwheel (clockwise, or away from you) until
	the sample surface appears to almost contact the blade. At this point, press the
	Trim button again to turn the feature off, and set the working section thickness
	with the hand dial located inside the refrigerated part of the cryostat, to the right
	of the sectioning head. 12-20 microns is typical. Now set the "cutting window",
	which identifies the top and bottom of the sample. Press the one stroke button,
	, once. Turn the handwheel until the sectioning head is on a downstroke,
	and "[ ]" is displayed on the screen. Continue to turn the handwheel slowly until
	the bottom of the sample is just in line with the blade. Press the button
	once to set the start of the cutting window. Continue to turn the handwheel
	until the top of the sample just disappears behind the blade, and push the same
	button once again to set the end of the cutting window. If you have done this
	correctly, when you push both run buttons at once, the machine should
	automatically go fast above and below the area you have indicated, but go very
	slowly through the sample, producing an even section. Flip down the clear
	plastic section guide to collect the sections most evenly. Ideally, the section
	should be slightly attached to the blade so that it doesn't curl up from both ends,
	enough that you can unroll the unattached portion of the section gently with a
	brush.
	Once sections are being shaved off satisfactorily, they must be collected on
	a Superfrost Plus slide. Collect the sections on the label side of the slide, usually 8
	sections to a slide. One embryo thickness of sections can produce 15-30 slides.
	The slides should be kept in a sealed slide box at 4°C until they can be rehydrated
	and mounted.
	Rehydrating and Mounting Slides.
	Care must be taken to avoid losing or damaging the tissue sections during the
	mounting process. The slides should be rehydrated in 1xPBS in small batches
	(alternating batches of 5 works well), so that the sections are not soaking too
	long, which can cause them to lift up when the coverslip is being placed. Ideally,
	most of the O.C.T. should have dissolved, but the section should still be firmly
	attached to the slide. Roughly 10 minutes rehydrating time usually works well.
	After rehydrating the slide, remove it from the slide holder, and blot the edges
	on a paper towel, removing most of the liquid, but leaving enough that the
	tissue-side of the slide is still visibly wet. Lay the slide flat on the paper towel,
	and apply two drops of Crystal/Mount to the face of the slide opposite the labelside.
	apply 2 drops here Immediately apply the 24x60 mm coverslip, left
	edge first, so that the liquid/air line travels toward the right, leaving no bubbles
	behind. Do not move the coverslip once it has been applied, because you may
	disturb the sections and distort their morphology. Blot the edges of slide again
	to absorb any excess liquid squeezed out during the application of the coverslip.
	Let the slide sit for about 1 hour, or until the Crystal/Mount has hardened. Seal
	the seam between the coverslip and the slide with nail polish to ensure that the
	sections will not dry out.
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