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细胞功能测定

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Quantifying Amplicons with ELISA

Among the numerous assays proposed for quantifying specific nucleic-acid sequences in biological samples, PCR offers the greatest sensitivity and versatility. The assay for quantifying the amount of polymerase chain reaction (PCR) products is a crucial step in any quantitative PCR ...

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Comparison of Competitive PCR and Positive Control-Based PCR

The exponential amplification of small amounts of nucleic acids makes polymerase chain reaction (PCR) not only powerful but also challenging as a quantitative method. Variations in nucleic acid preparation, thermal cyclic performance, the choice of the polymerase, and the amplifi ...

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Competitive PCR Quantitation Utilizing a Microtiter Plate Based Format for the Detection of PCR Products

In microbiology, the polymerase chain reaction (PCR) has become an important tool for the analysis of clinical samples. For example, it led to the detection of Hepatitis-B Virus DNA (HBV-DNA) in patients with serological patterns not previously associated with active infection (1). PCR-ba ...

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Competitive and Differential RT-PCR (CD-RT-PCR) for Measurement of Normalized Gene Expression Using Antisense Competitors

Quantitative mRNA characterization by reverse transcription (RT) of RNA and subsequent polymerase chain reaction (PCR) (RT-PCR) is, compared to qualitative RT-PCR detection of RNA, more complicated because of two features inherent in in vitro amplification. First, during the expo ...

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Amplified Assay for Specific Dual-Labeled DNA Using the Coagulation Cascade (EDNA-ELCA)

Detection of the products of the PCR reaction using nonisotopically labeled DNA molecules containing biotin, fluorescein, or digoxigenin has become a popular method for identification of specific products of polymerase chain reaction (PCR) (1,3). These labeled molecules are prep ...

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Quantitative PCR with Internal Standardization and OLA-ELISA Product Analysis for the p53 Tumor Suppressor Gene

Over the last nine years, several quantitative polymerase chain reaction (QPCR) techniques have been developed, and these are now frequently used for the quantification of DNA template copy numbers. However, only few of these PCR techniques are suitable for the precise and absolute quant ...

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Quantitative Analysis of Human DNA Sequences by PCR and Solid-Phase Minisequencing

The PCR technique provides highly specific and sensitive means for analyzing nucleic acids, but it does not allow their direct quantification. This limitation originates from the fact that the efficiency of PCR depends on the amount of template sequence present in the sample, and the amplif ...

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Construction of Polycompetitors for Competitive PCR

Many different protocols are now available for competitive polymerase chain reaction (PCR) and most rely on the use of a mimic or competitor that serves as a reference for quantitation (1–4). The success (or failure) of all these protocols is critically dependent on the design, construction, and ...

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High Resolution PCR Quantitation by AmpliSensor Assay

A real-time kinetic tool for polymerase chain reaction (PCR) quantitation, AmpliSensor assay (1) quantifies PCR product by relating the rate of an amplification reaction through the progressive depletion of a rate-limiting primer. AmpliSensor assay invokes a two-step amplifica ...

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Tailed RT-PCR for the Quantitation of Chloramphenicol Acetyl Transferase (CAT)mRNA

Reporter gene plasmids have been used extensively to monitor gene expression and elucidate intracellular pathways (1–4). They have been particularly useful in understanding the architecture of promoter regions and the interactions between promoter elements and cellular or vi ...

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A Stochastic PCR Approach for RNA Quantification in Multiple Samples

When studying the effect of various treatments on gene expression in humans, one occasionally is faced with the problem of detecting small changes in transcript levels in minute tissue samples. In addition, interindividual variations can be quite large and may even be the major source of vari ...

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Quantitation of mRNA Species by RT-PCR on Total mRNA Population with Nonradioactive Probes

Quantitative polymerase chain reaction (PCR) is aimed to determine the absolute or relative amounts of RNA or DNA sequences in a given sample. There are two facts limiting the convenience of this approach. First, in most cases, only one or two sequences are amplified in a given round of amplification. ...

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End-Point Titration-PCR for Quantitation of Cytomegalovirus DNA

Polymerase chain reaction (PCR) is an important qualitative procedure in the routine microbiology laboratory for detecting the presence or absence of potentially harmful microorganisms in clinical specimens (1,2). The use of PCR to quantify an infectious agent in a clinical specimen ...

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Competitor Calibration and Analysis of Competitive Amplified PCR Products by High-Performance Liquid Chromatography (HPLC)

To assay gene expression or virus genomes in tissues or body fluids, competitive polymerase chain reaction (cPCR) is now performed in many laboratories. cPCR is a quantitative adaption of the PCR method in which a known number of copies of a synthetic RNA (1) or DNA (2–4) is coamplified with the target sam ...

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Analysis of Amplified DNA Molecules by Capillary Electrophoresis and Laser Induced Fluorescence

The polymerase chain reaction (PCR) has revolutionized molecular biology. Portions of single-copy per cell genes (and cDNAs) prepared from very small tissue or cell samples can be specifically amplified for use in sequence determination, gene identification, and quantitation. Im ...

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Introduction to Nuclear Magnetic Resonance

This brief guide is not intended as a full explanation of the theory and practice of nuclear magnetic resonance (NMR), on which there are a large number of excellent texts (1–3), but as an introduction to the terms used in the subsequent chapters. The section as a whole does not provide a comprehensive outli ...

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Structural Studies of Proteins in Solution Using Proton Nuclear Magnetic Resonance

Nuclear magnetic resonance (NMR) spectroscopy has become established in recent years as a uniquely powerful technique for studying the structures of proteins in solution. In a 1H spectrum, each hydrogen atom in the molecule gives rise to an individual signal, and in favorable cases, it is poss ...

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Methods for Culturing Primary Sympathetic Neurons and for Determining Neuronal Viability

Developing nerve growth factor (NGF)-dependent sympathetic neurons are one of the best-studied in vitro models of neuronal apoptosis and have been used to identify key components of the neuronal cell death pathway. This chapter describes how to prepare purified cultures of primary symp ...

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Assays to Measure Stress-Activated MAPK Activity

Mitogen-activated protein kinases (MAPKs) are activated by a wide variety of cellular stimuli and involved in the regulation of most, if not all, cellular processes. Among them, the c-Jun N-terminal kinase and p38 MAPKs are predominantly induced in response to proinflammatory cytokines a ...

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Immunocytochemical Techniques for Studying Apoptosis in Primary Sympathetic Neurons

Developing sympathetic neurons, which depend on nerve growth factor for survival, are one of the best studied in vitro models of neuronal apoptosis and have been extensively used for cellular and molecular studies of the neuronal death pathway. Important apoptotic events after nerve gro ...

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