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前沿科技及其它

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Integrative Oncogenomic Analysis of Microarray Data in Hematologic Malignancies

During the last decade, gene expression microarrays and array-based comparative genomic hybridization (array–CGH) have unraveled the complexity of human tumor genomes more precisely and comprehensively than ever before. More recently, the simultaneous assessment of global ...

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Search for and Identification of Novel Tumor-Associated Autoantigens

During the development of tumors, autoantibodies against aberrant or overexpressed autoantigens can be induced. Several hundreds of tumor-associated autoantibodies (TAAB) with more or less specificity for tumors have been found until now by molecular cloning and proteomics te ...

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Application of Proteomics in Cancer Gene Profiling: Two-Dimensional Difference in Gel Electrophoresis (2D-DIGE)

In the post-genomic era, proteomic strategies are at the forefront of cancer research. By studying the complement of all expressed genes, proteomics aims to provide knowledge of biomarkers indicative of the physiological state of cancer cells at a specific time, enabling screening, early ...

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Single-Nucleotide Polymorphism (SNP) Analysis to Associate Cancer Risk

Identification of hereditary factors that predispose to cancer allows targeted cancer screening and better quantification of environmental risk factors. The ability to identify which single nucleotide polymorphisms (SNPs) are associated with cancer or segregate with dise ...

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The EGFR Pathway as an Example for Genotype: Phenotype Correlation in Tumor Genes

Tumor-specific and germ-line variations of DNA significantly contribute to tumor growth and its ability to develop resistance. Among several mechanisms that cause resistance to cancer treatment, the genotype of certain growth factors, like epidermal growth factor receptor (EG ...

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Calibration of Microarray Gene-Expression Data

Calibration of microarray measurements aims at removing systematic biases from the probe-level data to get expression estimates that linearly correlate with the transcript abundance in the studied samples. The improvement of calibration methods is an essential prerequisite f ...

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Meta-analysis of Cancer Gene-Profiling Data

DNA microarray profiles are plagued by the issue of large number of variables but small number of samples and are often notorious for their low signal-to-noise ratio for clinical applications. Therefore, a great need for meta-analysis techniques is emerging to yield more valid and informat ...

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Organizational Issues in Providing High-Quality Human Tissues and Clinical Information for the Support of Biomedical Research

Superior-quality human tissues are required to support many types of biomedical research. To be useful optimally in supporting research, not only must these tissues be accurately diagnosed, but also the specific aliquots of tissue supplied to investigators must be accurately descri ...

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Quantitation of CD39 Gene Expression in Pancreatic Tissue by Real-Time Polymerase Chain Reaction

Within the past decade, the field of gene expression analysis has constantly evolved, with numerous technologies being available for RNA quantification, including differential display, serial analysis of gene expression (SAGE), quantitative real-time (qRT) polymerase chain ...

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Isolation of Novel Markers for Hepatocellular Carcinoma by a Subtraction-Enhanced Display Technique

With an estimated annual incidence of between 250,000 and 1 million cases worldwide, hepatocellular carcinoma (HCC) is one of the most frequent malignancies in humans and occurs mainly in areas of Asia and Africa (1,2). Early diagnosis is critical for patients with HCC, because the 5-yr survival r ...

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Pharmacogenetic Analysis of Clinically Relevant Genetic Polymorphisms

With the recent publication of the human genome sequence, there has been an expanse of publicly available resources for pharmacogenomics research. Early estimates predicted that over 3 million single nucleotide polymorphisms (SNPs) are present in the human genome, with over 1.42 mill ...

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The Impact of Hepatitis B Virus (HBV) and Hepatitis C Virus (HCV): From Research to Clinical Practice

Hepatic carcinogenesis is a complex process that involves profound alterations of the hepatocyte genome (1,2) and has been graded in three stages: induction, promotion, and progression in the animal models (3–5). In recent years, the use of molecular biology techniques have improved sign ...

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Measurement of Protein Expression of p53, p21WAF1, and Rb in Patients with Surgically Treated Hepatocellular Carcinoma by Using Catalyzed Signal-Ampli

Hepatocellular carcinoma (HCC) is one of the most common human malignancies in the world and it is especially prevalent in Asia and Africa (1). Some tumors are suitable for resection, however, there is a very high rate of recurrence (2). Infection with hepatitis B or C virus, alcoholic cirrhosis, and in ...

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Mutation of p53 Tumor Suppressor Gene in Hepatocellular Carcinoma

In recent years, the most commonly observed genetic alteration in hepatocellular carcinoma (HCC), as in many other tumors affecting man, has been reported to be the mutation of the p53 coding gene (1,2). This gene has the features of a recessive oncosuppressor in its wild-type form and can be a dominant o ...

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Diagnostic Markers in Hepatocellular Carcinoma Using Immunohistochemical Techniques

Hepatocellular carcinoma (HCC) is the seventh most common cancer in men and the ninth in women with an estimated incidence of about 1 million per year worldwide. HCC also accounts for 90% of all primary hepatic malignancies, and in most cases, appears to be a consequence of chronic infection of the liver ...

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Assessing Matrix Metalloproteinase Expression and Activity in Hepatocellular Carcinomas

The matrix metalloproteinases (MMPs) constitute a large family of zincand calcium-dependent endopeptidases that cleave extracellular matrix components (1). Hence, MMPs are classified according to their substrate specificities: interstitial collagenases, stromel ...

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Gene Therapy Vectors Harboring AFP Regulatory Sequences: Preparation of an Adenoviral Vector

A goal of cancer research is to develop therapies that can selectively kill tumor cells without adversely affecting normal cells. In the case of hepatocellular carcinoma (HCC), there is a possibility that this goal may be achieved by introducing a cytotoxic gene under the control of transcrip ...

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Advantages and Disadvantages of Multiple Different Methods of Adenoviral Vector Construction

Adenoviruses are medium-sized nonenveloped DNA tumor viruses whose genome consists of a linear double-stranded DNA molecule of about 36 Kb (reviewed in refs. 1–3). Adenoviruses have icosahedral geometry with a diameter of approx 70-100 nm. Currently, over 100 different mammalian and fo ...

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p53 Plasmid Preparation and Techniques for Analysis of Gene Transfer and Expression

Hepatocellular carcinoma (HCC) is one of the most common causes of cancer death worldwide and is especially prevalent in certain areas of Africa and Asia. The most important etiological factor is infection with the hepatitis B or C virus. Treatment is generally unsatisfactory as the majority ...

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Electron Microscopic Assessment of Adenovirus-Mediated Transfer

This chapter describes the method of preparing and observing hepatocellular carcinoma (HCC) and surrounding normal liver cells infected with therapeutically p 53-transfected adenovirus (Ad-p 53), so that morphology of the cells and viruses, and crucially their relationships to e ...

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