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High-Resolution Measurements of Cyclic Adenosine Monophosphate Signals in 3D Microdomains

A large number of hormones, neurotransmitters, and odorants exert their effects on cells by triggering changes in intracellular levels of cyclic adenosine monophosphate (cAMP). Although the effector proteins that bind cAMP have been identified, it is not known how this single messeng ...

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Purification, Reconstitution on Lipid Vesicles, and Assays of PDE6 and Its Activator G Protein, Transducin

PDE6 in rod and cone photoreceptors is the principal effector of phototransduction. It is kept at a very low activity level in the dark, and in the light it is strongly activated by the guanosine 5′-triphosphate-bound form of the α-subunit of the G protein, transducin. Both transducin and PDE6 are perip ...

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Cygnets: In Vivo Characterization of Novel cGMP Indicators and In Vivo Imaging of Intracellular cGMP

The second messenger cyclic guanosine 5′-monophosphate (cGMP) plays a key role in the control and regulation of a steadily increasing number of diverse physiological processes. As the appreciation of the importance of understanding the cGMP signaling pathway has grown, so has the aware ...

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High-Throughput Screening of Phosphodiesterase Activity in Living Cells

Phosphodiesterases (PDEs) hydrolyze the second messengers cyclic adenosine monophosphate (cAMP) and cyclic guanosine 5′-monophosphate (cGMP) and play a crucial role in the termination and spatial segregation of cyclic nucleotide signals. Despite a wealth of molecular infor ...

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Assessment of Phosphodiesterase Isozyme Contribution in Cell and Tissue Extracts

Cyclic nucleotide phosphodiesterases (PDEs), which are ubiquitously distributed in mammalian tissues, play a major role in cell signaling by hydrolyzing cyclic adenosine 3′,5′-monophosphate and cyclic guanosine 3′,5′-monophosphate. Owing to their diversity, which allows s ...

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Determination of Ca2+/Calmodulin-Stimulated Phosphodiesterase Activity in Intact Cells

Ca2+/calmodulin (CaM)-stimulated phosphodiesterases (PDEs) constitute a large family (PDE1 family) of enzymes. All members of the PDE1 family can be stimulated by Ca2+ in the presence of CaM in vitro. It has been shown that the Ca2+/CaM-stimulated PDE activity present in the vessel wall or vascu ...

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Localization of the Cyclic Guanosine 3,5-Monophosphate- Hydrolyzing Phosphodiesterase Type 9 in Rat Brain by Nonradioactive In Situ Hybridization

In this chapter, we describe a protocol for the localization of the cyclic guanosine 3′,5′-monophosphate-specific phosphodiesterase type 9 (PDE9) mRNA in the adult rat brain that uses digoxigenin-labeled riboprobes in a nonradioactive in situ hybridization (ISH). The three differe ...

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Antibodies Against Malondialdehyde-Modified Proteins: Induction and ELISA Measurement of Specific Antibodies

Polyunsaturated fatty acids undergo in vivo oxidative damage called lipid peroxidation, breaking down to lipid hydroperoxides and various secondary products (1). Increase in lipid peroxides have been reported, for example, in radiation damage, diabetes, hyperlipidemia, and va ...

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Simple Procedure for Specific Assay of Lipid Hydroperoxides in Serum or Plasma

The level of lipid peroxides in serum or plasma has been found to be increased in various diseases (1), especially in vascular disorders such as angiopathy in diabetes (2), atherosclerosis (3), and apoplexy (4).

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Oxidized LDL and Lp(a): Preparation, Modification, and Analysis

During the last several years, it has become increasingly apparent that oxidation of low density lipoproteins (LDL) takes place in vivo as a key event in the development of human atherosclerosis (1,2) and vascular dysfunction (3,4). Thus, many laboratories have focused their interest on the in v ...

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Oxidized and Unoxidized Fatty Acyl Esters

Membrane phospholipids contain polyunsaturated fatty-acid side chains esterified to phosphoglycerol. These polyunsaturated fatty acyl esters are easily oxidable lipids. A sensitive method for determination of lipid peroxidation is of considerable interest. Usually l ...

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Synthesis of Lipid and Cholesterol Hydroperoxide Standards

Phospholipids and cholesterol are the lipid component of cellular and subcellular membranes and are transported primarily (65%) in low-density lipoproteins (1). The fatty acids of these compounds are easily attacked by reactive oxygen species leading to the formation of their respe ...

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Separation of Hydroxy and Hydroperoxy Polyunsaturated Fatty Acids By High-Pressure Liquid Chromatography

Lipid peroxidation is an autocatalytic free radical-mediated chemical mechanism in which polyunsaturated fatty acids (PUFA) undergo oxidation to form lipid hydroperoxide (LHP). Increased lipid peroxidation has been implicated in many disease conditions including acute m ...

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Products of Creatinine with Hydroxyl Radical as a Useful Marker of Oxidative Stress In Vivo

Methylguanidine (MG) was first discovered in the serum and urine of uremic patients (1). Increased synthesis of MG and its toxicity has been implicated as a potent uremic toxin (2).

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Quantitative Analysis of Peptide and Protein Changes in Ischemic Hippocampal Tissue by HPLC

Profiling of hippocampal peptides by reversed-phase HPLC (RP-HPLC) was used as a tool for identifying molecular events associated with neuro-degeneration following global cerebral i ischemia . Global cerebral ischemia is known to cause impairment of working memory, but not refere ...

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Electrochemical Detection of 8-Hydroxy-2-Deoxyguanosine Levels in Cellular DNA

Oxidative stress has been implicated in the etiology of many pathological states and known to result in DNA damage. Oxidative DNA damage can lead to mutagenesis (1–3) and has been associated with aging (4), diabetes mellitus (5), inflammatory disease (1) and carcinogenesis (1–3,6). The 8-hydro ...

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Nitric Oxide Synthase

Nitric oxide (NO) is an important bio-regulatory molecule in the nervous, immune and cardiovascular systems. The physiological involvement of NO in neuronal transmission, control of vascular tone, and immune response-induced cytostasis as well as the deleterious effects associ ...

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A Fluorescent-Based Assay for Measurement of Phospholipase A2 Activity: A Facile Assay for Cell Sonicates

Phospholipases A2 (PLA2) catalyze the hydrolysis of the ester bond at the sn-2 position of phospholipids to generate the lysophospholipid and free fatty acid (1). Several classes of PLA2s have been identified (2). They include the low molecular weight-secreted enzymes, which demonstrate a ...

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Quantitation of Heme Oxygenase (HO-1) Copies in Human Tissues by Competitive RT/PCR

A variety of oxidative stress-inducing agents, such as metals, ultra-violet (UV) light, heme, and hemoglobin have been implicated in the pathogenesis of the inflammatory process. The cellular response to such agents involves the production of a number of soluble mediators including acu ...

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Oxygen Consumption Methods: Xanthine Oxidase and Lipoxygenase

A biochemical paradox that has been observed for many years is now becoming understood: O2, essential for the aerobic life forms, can be inappropriately metabolized, becoming toxic to an organism. Mammals derive most of their cellular adenosine triphosphate (ATP) from the controlled fou ...

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