泛素化内质网塑形蛋白的异源簇驱动内质网自噬

Heteromeric clusters of ubiquitinated ER-shaping proteins drive ER-phagy

作者信息Hector Foronda, Yangxue Fu, Adriana Covarrubias-Pinto, Hartmut T Bocker, Alexis González, Eric Seemann, Patricia Franzka, Andrea Bock, Ramachandra M Bhaskara, Lutz Liebmann, Marina E Hoffmann, Istvan Katona, Nicole Koch, Joachim Weis, Ingo Kurth, Joseph G Gleeson, Fulvio Reggiori, Gerhard Hummer, Michael M Kessels, Britta Qualmann, Muriel Mari, Ivan Dikić, Christian A Hübner
PMID37225994
期刊Nature
发布时间2023-06
DOI10.1038/s41586-023-06090-9

摘要

具有网状蛋白同源结构域的膜塑形蛋白在内质网(ER)的动态重塑中发挥重要作用。FAM134B是此类蛋白的一个例子,它可以结合LC3蛋白并通过选择性自噬(ER-phagy)介导ER片层的降解。FAM134B的突变会导致人类神经退行性疾病,主要影响感觉和自主神经元。本文报道了另一种ER塑形蛋白ARL6IP1(同样含有网状蛋白同源结构域并与感觉丧失相关)与FAM134B相互作用,并参与形成ER-phagy所需的异源多蛋白簇。此外,ARL6IP1的泛素化促进了这一过程。相应地,在小鼠中敲除Arl6ip1会导致感觉神经元中ER片层扩张并随时间退化。从Arl6ip1缺陷小鼠或患者获得的原代细胞显示ER膜出芽不完全以及ER-phagy通量严重受损。因此,我们认为泛素化ER塑形蛋白的聚集促进了ER-phagy过程中ER的动态重塑,并且对神经元的维持至关重要。

实验方法

产品清单

名称品牌货号
BP克隆酶反应试剂盒Invitrogen11789100
LR克隆酶反应试剂盒Invitrogen--
T4多核苷酸激酶BioLabs--
SONY SH800S细胞分选仪SONY2.1.6
针状电极Science ProductsWE30030.1H10
抓力测试仪Ugo Basile--
滑动切片机LeicaSM 2000R
Cellobserver Z1显微镜Zeiss--
Leica TP20组织处理器Leica--
Leica HistoCore Arcadia包埋机Leica--
ThermoScientific Microm HM 355S切片机ThermoScientificHM 355S
Zeiss AxioLab A1显微镜ZeissAxioLab A1
Philips CM10透射电子显微镜PhilipsCM10
Zeiss EM 900数字透射电子显微镜ZeissEM 900
Leica EM UC7超薄切片机Leica MicrosystemsEM UC7
CM100bio透射电子显微镜FEICM100bio
Zeiss LSM 880共聚焦显微镜ZeissLSM 880
LookOut支原体PCR检测试剂盒Sigma--
GeneJuice转染试剂Merck-Millipore--
Turbofect转染试剂Thermo Scientific--
Lipofectamine 2000转染试剂Invitrogen--
Lipofectamine RNAiMAX转染试剂Invitrogen13778075
Ultra-Turrax T8组织匀浆器IKA-WERKET8
PVDF膜AmershamHybond P 0.45 µm
Clarity Western ECL底物Bio-Rad--
LAS 4000自动检测系统GE Healthcare4000
GoScript逆转录试剂盒Promega--
EvaGreen混合液Bio-Rad--
CFX96 Touch实时PCR检测系统Bio-RadCFX96 Touch
Yokogawa CQ1共聚焦成像细胞仪YokogawaCQ1
Duolink原位红色起始试剂盒Sigma-AldrichDUO92101
Zeiss Cell Observer Z1显微镜ZeissCell Observer Z1
Amicon Ultra-4-10k离心过滤装置MilliporeUltra-4-10k
LICOR Odyssey系统LICOR BioscienceOdyssey
Q Exactive HF质谱仪ThermoFisher ScientificQ Exactive HF
easy nLC 1200液相色谱仪ThermoFisher Scientificeasy nLC 1200
nanoFlex离子源ThermoFisher ScientificnanoFlex
Q Exactive HF质谱仪与easy nLC 1200联用系统ThermoFisher Scientific--
HA-琼脂糖珠Sigma-AldrichA2095
GFP-Trap珠Chromotekgta-20
Myc-Trap琼脂糖Chromotekyta-10
TUBE2琼脂糖珠Life SensorsUM402
Protein A琼脂糖珠Roche11719408001
完全蛋白酶抑制剂Roche--
Heraeus Sepatech Megafuge 2.0R离心机Heraeus SepatechMegafuge 2.0R
Bio-Rad TC20自动细胞计数器Bio-RadTC20
SDB-RPS stage tipsSigma--