A neoantigen vaccine generates antitumour immunity in renal cell carcinoma

作者信息David A Braun, Giorgia Moranzoni, Vipheaviny Chea, Bradley A McGregor, Eryn Blass, Chloe R Tu, Allison P Vanasse, Cleo Forman, Juliet Forman, Alexander B Afeyan, Nicholas R Schindler, Yiwen Liu, Shuqiang Li, Jackson Southard, Steven L Chang, Michelle S Hirsch, Nicole R LeBoeuf, Oriol Olive, Ambica Mehndiratta, Haley Greenslade, Keerthi Shetty, Susan Klaeger, Siranush Sarkizova, Christina B Pedersen, Matthew Mossanen, Isabel Carulli, Anna Tarren, Joseph Duke-Cohan, Alexis A Howard, J Bryan Iorgulescu, Bohoon Shim, Jeremy M Simon, Sabina Signoretti, Jon C Aster, Liudmila Elagina, Steven A Carr, Ignaty Leshchiner, Gad Getz, Stacey Gabriel, Nir Hacohen, Lars R Olsen, Giacomo Oliveira, Donna S Neuberg, Kenneth J Livak, Sachet A Shukla, Edward F Fritsch, Catherine J Wu, Derin B Keskin, Patrick A Ott, Toni K Choueiri
PMID39910301
期刊Nature
发布时间2025-03
DOI10.1038/s41586-024-08507-5
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摘要

Personalized cancer vaccines (PCVs) can generate circulating immune responses against predicted neoantigens1-6. However, whether such responses can target cancer driver mutations, lead to immune recognition of a patient's tumour and result in clinical activity are largely unknown. These questions are of particular interest for patients who have tumours with a low mutational burden. Here we conducted a phase I trial (ClinicalTrials.gov identifier NCT02950766) to test a neoantigen-targeting PCV in patients with high-risk, fully resected clear cell renal cell carcinoma (RCC; stage III or IV) with or without ipilimumab administered adjacent to the vaccine. At a median follow-up of 40.2 months after surgery, none of the 9 participants enrolled in the study had a recurrence of RCC. No dose-limiting toxicities were observed. All patients generated T cell immune responses against the PCV antigens, including to RCC driver mutations in VHL, PBRM1, BAP1, KDM5C and PIK3CA. Following vaccination, there was a durable expansion of peripheral T cell clones. Moreover, T cell reactivity against autologous tumours was detected in seven out of nine patients. Our results demonstrate that neoantigen-targeting PCVs in high-risk RCC are highly immunogenic, capable of targeting key driver mutations and can induce antitumour immunity. These observations, in conjunction with the absence of recurrence in all nine vaccinated patients, highlights the promise of PCVs as effective adjuvant therapy in RCC.

实验方法

产品清单

名称品牌货号
Qiagen DNA FFPE QIAamp试剂盒QiagenQIAamp
Qiagen AllPrep DNA/RNA FFPE试剂盒QiagenAllPrep
Kapa HyperPrep试剂Kapa--
Illumina Nextera外显子组试剂盒IlluminaNextera Exome
安捷伦Bravo液体处理系统AgilentBravo
Illumina HiSeq测序仪IlluminaHiSeq
Illumina NovaSeq测序仪IlluminaNovaSeq
Quant-iT RiboGreen RNA检测试剂盒--Quant-iT RiboGreen
Caliper LabChip GX系统CaliperLabChip GX
TruSeq RNA Access文库制备试剂盒IlluminaTruSeq RNA Access
Qiagen RNeasy试剂盒QiagenRNeasy
NEB单细胞/低输入cDNA合成与扩增模块NEBNEBNext Single Cell/Low Input
Olink Target 96免疫肿瘤学检测OlinkTarget 96
10x Genomics Chromium仪器10x GenomicsChromium
Chromium单细胞5'试剂盒v.210x GenomicsChromium single cell 5′ kit v.2
Chromium单细胞人TCR扩增试剂盒10x GenomicsChromium single-cell human TCR amplification kit
Illumina NovaSeq S4测序仪IlluminaNovaSeq S4
DigitizeIt软件--DigitizeIt
BD LSR Fortessa流式细胞仪BDLSR Fortessa