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        丁香实验推荐阅读
        Measuring mtDNA Damage Using a Supercoiling-Sensitive qPCR Approach

        Compromised mitochondrial DNA structural integrity can have functional consequences in mitochondrial gene expression and replication leading to metabolic and degenerative diseases, aging and cancer. Gel electrophoresis coupled with Southern blot and probe hybridiza ...

        丁香实验推荐阅读
        Quantitative Analysis of Oxidized Guanine, 8-Oxoguanine, in Mitochondrial DNA by Immunofluorescence Method

        8-Oxoguanine (8-oxoG), an oxidized form of guanine, is one of the major mutagenic lesions generated under oxidative stress. Oxidative damage in mitochondrial DNA has been implicated as a causative factor for a wide variety of degenerative diseases as well as for cancer during aging. We establ ...

        丁香实验推荐阅读
        In Vitro Measurement of DNA Base Excision Repair in Isolated Mitochondria

        Mitochondrial DNA (mtDNA) is in relatively close proximity to reactive oxygen species (ROS) arising from spontaneous superoxide formation during respiration. As a result, it sustains oxidative damage that may include base modifications, base loss, and strand breaks. mtDNA replic ...

        丁香实验推荐阅读
        Targeting Repair Proteins to the Mitochondria of Mammalian Cells Through Stable Transfection, Transient Transfection, Viral Transduction, and TAT-Medi

        The mitochondrial genome represents a target for exogenous and endogenous damage. Its necessity for successful electron transport makes its repair valuable to the cell. Previous work from our lab has shown that mitochondrial DNA (mtDNA) can be repaired in mammalian cells, and the use of mito ...

        丁香实验推荐阅读
        Mitochondrial DNA Oxidative Damage and Mutagenesis in Saccharomyces cerevisiae

        Mutation of human mitochondrial DNA (mtDNA) has been linked to maternally inherited neuromuscular disorders and is implicated in more common diseases such as cancer, diabetes, and Parkinson’s disease. Mutations in mtDNA also accumulate with age and are therefore believed to contrib ...

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        Construction and Characterization of a Cell Line Deficient in Repair of Mitochondrial, but Not Nuclear, Oxidative DNA Damage

        Oxidative base lesions, such as 8-oxoguanine, accumulate in nuclear and mitochondrial DNAs under oxidative stress, resulting in cell death. However, it is not known whether only oxidative lesion accumulated in mitochondrial DNA is involved in such cell death. By introducing human cDNA e ...

        丁香实验推荐阅读
        Determination of DNA Mutation Load in Human Tissues Using Denaturing HPLC-Based Heteroduplex Analysis

        Since its introduction more than a decade ago, denaturing HPLC has been widely used to screen nuclear and mitochondrial DNA for mutations. We recently developed a quantitative method based on denaturing HPLC to measure DNA mutation load, using tRNA Leu(UUR) region of the mitochondrial DNA as an ...

        丁香实验推荐阅读
        Rapid Identification of Unknown Heteroplasmic Mitochondrial DNA Mutations with Mismatch-Specific Surveyor Nuclease

        Identification of mitochondrial DNA (mtDNA) mutations is essential for diagnosis and genetic counseling of mitochondrial diseases. In this chapter, we describe a strategy for the rapid identification of heteroplasmic mtDNA mutations that can be used routinely in molecular gene ...

        丁香实验推荐阅读
        Collection of Isolated Cells for Studying Mitochondrial DNA Mutations Within Individual Cells

        Mitochondrial genome integrity is an important issue in somatic mitochondrial genetics. Development of quantitative methods is indispensable to somatic mitochondrial genetics as quantitative studies are required to characterize heteroplasmy and mutation processes, ...

        丁香实验推荐阅读
        Quantitative Analysis of Somatic Mitochondrial DNA Mutations by Single-Cell Single-Molecule PCR

        Mitochondrial genome integrity is an important issue in somatic mitochondrial genetics. Development of quantitative methods is indispensable to somatic mitochondrial genetics as quantitative studies are required to characterize heteroplasmy and mutation processes, ...

        丁香实验推荐阅读
        Measuring DNA Precursor Pools in Mitochondria

        The ability to measure molar concentrations of deoxyribonucleoside 5′-triphosphates (dNTPs) within the mitochondrial matrix is important for several reasons. First, the spontaneous mutation rate for the mitochondrial genome is much higher than that for the nuclear genome, and dN ...

        丁香实验推荐阅读
        Evaluating Response to Antineoplastic Drug Combinations in Tissue Culture Models

        The mainstay of clinical antineoplastic chemotherapy is multiagent combinations, most of which were developed empirically. Because of the desire to speed research and decrease costs, there is increasing interest in moving new drugs into clinical trials in potentially active comb ...

        丁香实验推荐阅读
        Overview of Novel Anticancer Drug Targets

        There has been an explosion in the number of potential molecular targets that can be explored for selective cancer treatment. The stage is now set to translate years of productive cancer research into more patient-friendly anticancer therapeutics. At present, the challenge is how to identi ...

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        Assays for In Vitro and In Vivo Synergy

        In the study of multi-modality therapy or combined chemotherapy, it is of interest to determine whether the combined effects of two agents are additive or whether their combination is substantially different from the sum of their parts (1,2). While controversy and discussion continue and n ...

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        Flow Cytometric Methods for Detection and Quantification of Apoptosis

        The accumulation of cells characteristic of neoplastic disease results from the combination of unrestrained cell growth and diminished cell death. One form of programmed cell death, apoptosis (a Greek neologism meaning “dropping off” that conjures images of leaves falling from a tree ...

        丁香实验推荐阅读
        Assays for Neoplastic Cell Enrichment in Bone Marrow Samples

        Most hematological malignancies have clonal cells that reside in the bone marrow environment, and their analysis is critical for diagnosis (1). In the process of procuring a clinical sample, research samples are frequently obtained, and their prompt and appropriate management should ...

        丁香实验推荐阅读
        Assays for Cyclin-Dependent Kinase Inhibitors

        Cyclin-dependent kinases (CDK) are serine/threonine kinases that regulate cell cycle control and progression (1,2). A CDK holoenzyme complex is active if associated with its cyclin partner and if the complex is phosphorylated at specific activating residues (threonine 160/161) (1 ...

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        Identifying Inhibitors of ATM and ATR Kinase Activities

        The Ataxia Telangiectasia mutated (ATM) and the ATM and Rad3-related (ATR) proteins function in partially overlapping DNA damage checkpoint pathways that orchestrate the cellular response to DNA damage. Both proteins belong to a growing family of serine/threonine-directed kina ...

        丁香实验推荐阅读
        Determination of Peak Serum Levels and Immune Response to the Humanized Anti-Ganglioside Antibody-Interleukin-2 Immunocytokine

        Tumor reactive monoclonal antibodies (mAb) have been developed and tested as anti-tumor therapy. Some mAb have shown efficacy and are now approved as clinical cancer therapy. The mechanism of action for the antitumor effect includes tumor cell destruction by effector cells with Fc recept ...

        丁香实验推荐阅读
        Binding Assay for Selectins

        Selectins form a group of C-type lectins, which bind to carbohydrates in a calcium dependent manner. Three selectins, E-, L-, and P-selectins are known. All selectins bind to sialyl Lewis X (sLex). E-selectin (endothelial cell adhesion molecule-1 or ELAM-1; CD62E) is expressed in the endothelial c ...

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