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        丁香实验推荐阅读
        Microfluidic Image Cytometry

        Cell-based arrays offer powerful tools for genomics/proteomics and drug discovery, and are widely applicable for most cell lines. However, it is challenging to apply cell-based arrays for in vitro diagnosis due to limited amount of patient samples. Here, we utilized and demonstrated micr ...

        丁香实验推荐阅读
        Cell-Based Microarrays: Overview

        Cell-based microarrays were first described by Ziauddin and Sabatini in 2001 as a novel method for performing high-throughput screens of gene function. They reported a technique whereby expression vectors containing the open reading frame (ORF) of human genes were printed onto glass mi ...

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        Cell-Based Co-transfection Microarrays for Use with HEK293T Cells on a Poly d-Lysine-Coated Polystyrene Microplate

        Analysis of the human genome sequence has identified thousands of putative genes with unknown function; therefore, a new tool allowing for rapid identification of gene functions is needed. Reverse transfection microarray technology, which turns a DNA microarray into a cell-based mi ...

        丁香实验推荐阅读
        Large-Scale Cell-Based Microarrays and Their Use with HEK293T Cells and Downstream Apoptotic Assays

        Cell-based microarrays are a powerful technology platform for performing high-throughput screens of gene function. The approach entails printing expression vectors containing either genes or shRNAs onto a glass microscope slide or 384-well microtitre plate to form an array. The ...

        丁香实验推荐阅读
        A Novel Fluorescent Transcriptional Reporter for Cell-Based Microarray Assays

        Cell-based microarrays have been used for a wide variety of assays including gain-of-function, loss-of-function and compound screening. Many of these assays have employed fluorescent proteins as reporters. These fluorescent reporter proteins can be monitored in living cells but h ...

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        High-Throughput Immunofluorescence Microscopy Using Yeast Spheroplast Cell-Based Microarrays

        We have described a protocol for performing high-throughput immunofluorescence microscopy on microarrays of yeast cells. This approach employs immunostaining of spheroplasted yeast cells printed as high-density cell microarrays, followed by imaging using automated mic ...

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        Cell Arrays for the Measurement of Organelle Dynamics in Living Cells

        The Golgi complex is the central organelle in the secretory membrane trafficking and its organization strongly depends upon the flow of coming and leaving material. The principles of cargo transfer to, through, and away from the Golgi complex were investigated in numerous studies. Howeve ...

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        Cell-Based Microarrays of Infectious Adenovirus Encoding Short Hairpin RNA (shRNA)

        Genome-wide screening procedures have developed into a useful tool for assigning new functions to known proteins or for identifying new interplayers in cell metabolism, especially under pathological conditions. Since primary cells reflect the physiological situation more c ...

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        Reverse Transfected Cell Microarrays in Infectious Disease Research

        Several human pathogenic viruses encode large genomes with often more than 100 genes. Viral pathogenicity is determined by carefully orchestrated co-operative activities of several different viral genes which trigger the phenotypic functions of the infected cells. Systemat ...

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        Methods for Assessing Binding of Mitochondrial Transcription Factor A (TFAM) to DNA

        It is now recognized that mammalian mitochondrial DNA forms a higher structure called the nucleoid, corresponding to the nucleosome of nuclear DNA. Mitochondrial transcription factor A (TFAM), which was cloned as a transcription factor for mitochondrial DNA, is essential for the main ...

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        Preparation of Human Mitochondrial Single-Stranded DNA-Binding Protein

        Defects in mtDNA replication are the principle cause of severe, heritable metabolic disorders classified as mitochondrial diseases. In vitro analysis of the biochemical mechanisms of mtDNA replication has proven to be a powerful tool for understanding the origins of mitochondrial ...

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        Studying Drug-Tubulin Interactions by X-Ray Crystallography

        Tubulin, the microtubule building-block, is the target of numerous small molecule compounds that interfere with microtubule dynamics. Several of these ligands are in clinical use as antitumor drugs. There have been numerous studies on these molecules, with two main objectives: to dete ...

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        Characterizing Ligand-Microtubule Binding by Competition Methods

        The knowledge of the thermodynamics and kinetics of drug-microtubule interaction is essential to understand the structure/affinity relationship of a given ligand family. When a ligand does not show an appropriate signal change (absorbance or fluorescence) upon binding, the exte ...

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        Methods for Studying Vinca Alkaloid Interactions With Tubulin

        Vinca alkaloids play a vital role in chemotherapy protocols for a wide range of hematological and solid tumors. Studies of drug interactions with the drug target, tubulin or microtubules, have helped us to understand the cytotoxic and toxic effects. We present here in vivo and in vitro methods for s ...

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        High-Throughput Screening of Microtubule-Interacting Drugs

        Drugs that affect microtubule dynamics are among the most effective anticancer agents in routine clinical use. The standard assay for antimicrotubule agents observes the ability of a particular substance to affect in vitro microtubule assembly. We have modified these procedures so t ...

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        Strategies for the Development of Novel Taxol-Like Agents

        Taxol, the first microtubule stabilizer identified, is one of the most important new anticancer drugs to be brought to the clinic in the past 20 yr. The clinical success of Taxol? led to the development of a second-generation taxane, docetaxel (Taxotere™), and multiple third-generation taxane d ...

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        Large Scale Purification of Brain Tubulin With the Modified Weisenberg Procedure

        This method is a modification of the initial procedure employed to purify tubulin from mammalian brain. It consists of tissue homogenization, elimination of cell membranes, ammonium sulfate fractionation, and batch anion exchange, followed by selective precipitation with magn ...

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        Purification and Mass-Spectrometry Identification of Microtubule-Binding Proteins from Xenopus Egg Extracts

        Microtubule-binding proteins are conveniently divided into two large groups: MAPs (microtubule-associated proteins), which can stabilize, anchor, and/or nucleate microtubules, and motors, which use the energy of ATP hydrolysis for a variety of functions, including microtub ...

        丁香实验推荐阅读
        Preparation and Characterization of Posttranslationally Modified Tubulins From Artemia franciscana

        Tubulin heterogeneity within eukaryotic cells is generated by differential gene expression and posttranslational modification of α- and β-tubulin gene products, either as heterodimers or when polymerized into microtubules. The characterization of posttranslational ...

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        Fluorescence Microscopy of Microtubules in Cultured Cells

        Cytoplasmic microtubules are noncovalent polymers of the protein tubulin. In the cells, the main function of microtubules is to provide tracks for organelle transport. Two experimental approaches based on fluorescence microscopy are commonly used to examine organization of mic ...

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