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        丁香实验推荐阅读
        Regulation of Convergent Extension by Non-canonical Wnt Signaling in the Xenopus Embryo

        Non-canonical Wnt signaling is an important regulator of gastrulation in Xenopus. In particular, it has been implicated in the control of convergent extension movements. Convergent extension in the gas-trula occurs primarily in the dorsal tissue of the marginal zone, and explants of this ...

        丁香实验推荐阅读
        Dorsal Axis Duplication as a Functional Readout for Wnt Activity

        The easy accessibility, distinctive features of early cleavage stage embryos and simple manipulation methods make Xenopusembryos an ideal model organism to study gene function and deciphering signaling pathways. For many years, investigators have analyzed putative dorsal ...

        丁香实验推荐阅读
        Wnt-Frizzled Interactions in Xenopus

        The Wnt signaling cascades are regulatory modules which are involved in embryonic patterning, cell differentiation, morphogenesis, and diseases (1, 2). The Wnt pathways are activated when secreted Wnt ligands interact with 7-trans-membrane receptors of the Frizzled (Fz) family. Sp ...

        丁香实验推荐阅读
        Inducible Gene Expression in Transient Transgenic Xenopus Embryos

        Xenopus laevis has for many years been successfully used to study Wnt signaling during early development. However, because loss of function and gain of function experiments generally involve injecting RNA, DNA, or morpholinos into early embryos (1- to 32-cell), major phenotypes are often o ...

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        How The Mother Can Help: Studying Maternal Wnt Signaling by Anti-sense-mediated Depletion of Maternal mRNAs and the Host Transfer Technique

        Early development in Xenopus laevis is controlled by maternal gene products synthesized during oogen-esis. The dorsal/ventral and anterior/posterior axes are established as a result of canonical Wnt signaling activity. The functions of maternal genes in embryonic development ...

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        Gain-of-Function and Loss-of-Function Strategies in Xenopus

        Xenopus embryos are particularly suited for functional experiments to investigate vertebrate embryonic development. Due to the large size of embryos and their development outside of the mother organism, they are very accessible, easy to manipulate, and allow for immediate observa ...

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        Analysis of Telomeres and Telomerase

        The terminal chromatin structures at the ends of eukaryotic chromosomes, the telomeres, are a focus of intensive research due to their importance for the maintenance of chromosome integrity. Their shortening due to incomplete replication functions as a molecular clock counting the n ...

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        Fluorescent Transgenes to Study Interphase Chromosomes in Living Plants

        Fluorescence tagging of genomic sites through the use of bacterial operator/repressor systems combined with fluorescent proteins permits high-resolution analysis of interphase chromosomes in living cells. This technique has been used to study interphase chromosome arra ...

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        Multicolor 3D Fluorescence In Situ Hybridization for Imaging Interphase Chromosomes

        Fluorescence in situ hybridization (FISH) of specific DNA probes has become a widely used technique mostly for chromosome analysis and for studies of the chromosomal location of specific DNA segments in metaphase preparations as well as in interphase nuclei. FISH on 3D-preserved nuclei ...

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        The Nuclear UbiquitinProteasome System: Visualization of Proteasomes, Protein Aggregates, and Proteolysis in the Cell Nucleus

        The 20S proteasome is part of a larger complex, the 26S proteasome, that is implicated in the ATP-dependent degradation of multiubiquitin-conjugated proteins (1). About 80% of intracellular protein breakdown occurs via the ubiquitinproteasome system (UPS). Key proteins such as tran ...

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        Isolation of Pathology-Associated Intranuclear Inclusions

        An emerging theme in neurodegenerative diseases is the aggregation of proteins as inclusions in neural cells. Their presence is a useful tool in the differential diagnosis of the particular illness, although in no instance is the specific role of the inclusions in disease pathogenesis und ...

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        Isolation of the Constitutive Heterochromatin from Mouse Liver Nuclei

        A method for isolation of constitutive heterochromatin (chromocenters) from nuclei of mouse liver cells is described. This method is based on the higher resistance of chromocenters to low ionic strength treatment as compared with that of nucleoli and euchromatin. The method allows sep ...

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        The Perinucleolar Compartment (PNC): Detection by Immunohistochemistry

        The perinucleolar compartment (PNC) is a dynamic, irregularly shaped, and electron-dense nuclear structure that is physically associated with the nucleolus (1). It is found predominantly in transformed cells and various cancer tissues, and rarely in normal cells (1). The components of ...

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        Time-lapse Microscopy and Fluorescence Resonance Energy Transfer to Analyze the Dynamics and Interactions of Nucleolar Proteins in Living Cells

        The dynamics of proteins play a key role in the organization and control of nuclear functions. Techniques were developed recently to observe the movement and interactions of proteins in living cells; time-lapse microscopy using fluorescent-tagged proteins gives access to observat ...

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        Isolation of Nucleoli from Ehrlich Ascites Tumor Cells and Dynamics of Nascent RNA within Isolated Nucleoli

        Here we describe a new, rapid method for isolating nucleoli from Ehrlich tumor cells that preserves their morphological integrity and high transcriptional activity. Until now, methods for isolation of nucleoli were generally assumed to empty one of their three main compartments, the fi ...

        丁香实验推荐阅读
        Three-Dimensional Reconstruction of Nucleolar Components by Electron Microscope Tomography

        The nucleus is a complex volume constituted of numerous subcompartments in which specific functions take place due to a specific spatial organization of their molecular components. To understand how these molecules are spatially organized within these machineries, it is necessary ...

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        Methods for Studying the Nuclei and Chromosomes of Dinoflagellates

        Dinoflagellates are unicellular eukaryotic organisms whose nuclear structure, chromosome architecture, chromatin organization, DNA composition, and mitosis show original features. It has been necessary to adapt techniques and to create innovative methods for growing c ...

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        High-Yield Isolation and Subcellular Proteomic Characterization of Nuclear and Subnuclear Structures from Trypanosomes

        The vast evolutionary distance between the Opisthokonta (animals and yeast) and the excavata (a major group of protists, including Giardia and Trypanosoma) presents a significant challenge to in silico functional genomics and ortholog identification. Subcellular proteomic i ...

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        Preparation of Arabidopsis Nuclei and Nucleoli

        We describe a method for isolating nuclei from cultured Arabidopsis cells. The same method can be used to further isolate nucleoli. Cell walls are first digested to yield protoplasts, which are purified by flotation on a Percoll gradient. Mechanical homogenisation is used to release nuclei, ...

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        Working with Oocyte Nuclei: Cytological Preparations of Active Chromatin and Nuclear Bodies from Amphibian Germinal Vesicles

        The giant nucleus or germinal vesicle (GV) of amphibian oocytes presents a remarkable opportunity to examine nuclear structures in unprecedented levels of detail. By making use of spread preparations of GVs, it is possible to investigate the structure and function of transcription uni ...

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